Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20■□□□□ 0.79
VARSP26640 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20■□□□□ 0.79
VARSP26640 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20■□□□□ 0.79
VARSP26640 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VARSP26640 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
VARSP26640 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
VARSP26640 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARSP26640 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARSP26640 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.99■□□□□ 0.79
VARSP26640 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.99■□□□□ 0.79
VARSP26640 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.99■□□□□ 0.79
VARSP26640 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VARSP26640 AC245052.3-201ENST00000450182 901 ntBASIC19.99■□□□□ 0.79
VARSP26640 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.99■□□□□ 0.79
VARSP26640 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.99■□□□□ 0.79
VARSP26640 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.99■□□□□ 0.79
VARSP26640 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VARSP26640 AL109923.1-201ENST00000618799 583 ntBASIC19.99■□□□□ 0.79
VARSP26640 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.99■□□□□ 0.79
VARSP26640 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARSP26640 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
VARSP26640 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARSP26640 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARSP26640 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VARSP26640 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VARSP26640 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.99■□□□□ 0.79
VARSP26640 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.98■□□□□ 0.79
VARSP26640 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
VARSP26640 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.98■□□□□ 0.79
VARSP26640 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.98■□□□□ 0.79
VARSP26640 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.98■□□□□ 0.79
VARSP26640 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.98■□□□□ 0.79
VARSP26640 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
VARSP26640 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
VARSP26640 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VARSP26640 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
VARSP26640 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.98■□□□□ 0.79
VARSP26640 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.97■□□□□ 0.79
VARSP26640 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
VARSP26640 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VARSP26640 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VARSP26640 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
VARSP26640 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
VARSP26640 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VARSP26640 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VARSP26640 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VARSP26640 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VARSP26640 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VARSP26640 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VARSP26640 TMEM191A-211ENST00000637163 1067 ntBASIC19.97■□□□□ 0.79
VARSP26640 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VARSP26640 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VARSP26640 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VARSP26640 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VARSP26640 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VARSP26640 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.97■□□□□ 0.79
VARSP26640 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
VARSP26640 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.96■□□□□ 0.79
VARSP26640 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.96■□□□□ 0.79
VARSP26640 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.96■□□□□ 0.79
VARSP26640 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
VARSP26640 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.96■□□□□ 0.79
VARSP26640 NCF1B-203ENST00000435988 1254 ntBASIC19.96■□□□□ 0.79
VARSP26640 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.96■□□□□ 0.79
VARSP26640 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.96■□□□□ 0.79
VARSP26640 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.96■□□□□ 0.79
VARSP26640 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.96■□□□□ 0.79
VARSP26640 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.96■□□□□ 0.79
VARSP26640 MYCNOS-205ENST00000641950 531 ntBASIC19.96■□□□□ 0.79
VARSP26640 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.96■□□□□ 0.79
VARSP26640 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.96■□□□□ 0.79
VARSP26640 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VARSP26640 GABARAPL3-202ENST00000624044 1851 ntBASIC19.96■□□□□ 0.79
VARSP26640 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms