Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.74■□□□□ 0.59
RPS4Y1P22090 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.74■□□□□ 0.59
RPS4Y1P22090 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.74■□□□□ 0.59
RPS4Y1P22090 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RPS4Y1P22090 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.74■□□□□ 0.59
RPS4Y1P22090 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.74■□□□□ 0.59
RPS4Y1P22090 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 AC087633.2-202ENST00000565166 1439 ntBASIC18.74■□□□□ 0.59
RPS4Y1P22090 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y1P22090 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y1P22090 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.73■□□□□ 0.59
RPS4Y1P22090 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.73■□□□□ 0.59
RPS4Y1P22090 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS4Y1P22090 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y1P22090 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RPS4Y1P22090 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.73■□□□□ 0.59
RPS4Y1P22090 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS4Y1P22090 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS4Y1P22090 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y1P22090 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y1P22090 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y1P22090 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.73■□□□□ 0.59
RPS4Y1P22090 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y1P22090 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y1P22090 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RPS4Y1P22090 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y1P22090 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y1P22090 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y1P22090 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.72■□□□□ 0.59
RPS4Y1P22090 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y1P22090 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y1P22090 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RPS4Y1P22090 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y1P22090 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RPS4Y1P22090 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RPS4Y1P22090 CNN2P6-201ENST00000439038 900 ntBASIC18.72■□□□□ 0.59
RPS4Y1P22090 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.72■□□□□ 0.59
RPS4Y1P22090 DUX4L16-201ENST00000555130 1264 ntBASIC18.72■□□□□ 0.59
RPS4Y1P22090 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y1P22090 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RPS4Y1P22090 AC016405.3-201ENST00000607710 860 ntBASIC18.72■□□□□ 0.59
RPS4Y1P22090 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y1P22090 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS4Y1P22090 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS4Y1P22090 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y1P22090 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y1P22090 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y1P22090 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS4Y1P22090 CYP21A1P-202ENST00000354927 1481 ntBASIC18.71■□□□□ 0.59
RPS4Y1P22090 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RPS4Y1P22090 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RPS4Y1P22090 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.71■□□□□ 0.59
RPS4Y1P22090 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.71■□□□□ 0.59
RPS4Y1P22090 AC016769.1-201ENST00000409132 1010 ntBASIC18.71■□□□□ 0.59
RPS4Y1P22090 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.71■□□□□ 0.59
RPS4Y1P22090 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.71■□□□□ 0.59
RPS4Y1P22090 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.71■□□□□ 0.59
RPS4Y1P22090 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.71■□□□□ 0.59
RPS4Y1P22090 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.71■□□□□ 0.59
RPS4Y1P22090 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y1P22090 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RPS4Y1P22090 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.7■□□□□ 0.58
RPS4Y1P22090 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RPS4Y1P22090 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
RPS4Y1P22090 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y1P22090 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y1P22090 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RPS4Y1P22090 PGM5P4-201ENST00000421970 445 ntBASIC18.7■□□□□ 0.58
RPS4Y1P22090 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y1P22090 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.7■□□□□ 0.58
RPS4Y1P22090 AL162430.1-201ENST00000480705 870 ntBASIC18.7■□□□□ 0.58
RPS4Y1P22090 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.7■□□□□ 0.58
RPS4Y1P22090 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.7■□□□□ 0.58
RPS4Y1P22090 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms