Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.14■□□□□ 0.33
CXCL3P19876 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CXCL3P19876 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CXCL3P19876 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CXCL3P19876 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CXCL3P19876 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CXCL3P19876 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CXCL3P19876 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.14■□□□□ 0.33
CXCL3P19876 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CXCL3P19876 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CXCL3P19876 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CXCL3P19876 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.13■□□□□ 0.33
CXCL3P19876 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL3P19876 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL3P19876 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL3P19876 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CXCL3P19876 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CXCL3P19876 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.13■□□□□ 0.33
CXCL3P19876 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.13■□□□□ 0.33
CXCL3P19876 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.13■□□□□ 0.33
CXCL3P19876 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL3P19876 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
CXCL3P19876 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL3P19876 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL3P19876 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL3P19876 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.13■□□□□ 0.33
CXCL3P19876 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.13■□□□□ 0.33
CXCL3P19876 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CXCL3P19876 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL3P19876 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL3P19876 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CXCL3P19876 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CXCL3P19876 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL3P19876 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CXCL3P19876 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CXCL3P19876 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCL3P19876 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.12■□□□□ 0.33
CXCL3P19876 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.12■□□□□ 0.33
CXCL3P19876 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.12■□□□□ 0.33
CXCL3P19876 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CXCL3P19876 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 AC092720.2-201ENST00000602388 1665 ntBASIC17.12■□□□□ 0.33
CXCL3P19876 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.12■□□□□ 0.33
CXCL3P19876 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CXCL3P19876 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CXCL3P19876 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCL3P19876 Z82202.1-201ENST00000623446 1880 ntBASIC17.12■□□□□ 0.33
CXCL3P19876 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.11■□□□□ 0.33
CXCL3P19876 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCL3P19876 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CXCL3P19876 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.11■□□□□ 0.33
CXCL3P19876 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.11■□□□□ 0.33
CXCL3P19876 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.11■□□□□ 0.33
CXCL3P19876 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.11■□□□□ 0.33
CXCL3P19876 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CXCL3P19876 TSPY13P-201ENST00000338964 914 ntBASIC17.11■□□□□ 0.33
CXCL3P19876 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.11■□□□□ 0.33
CXCL3P19876 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.11■□□□□ 0.33
CXCL3P19876 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CXCL3P19876 PVT1_1.1-201ENST00000615125 194 ntBASIC17.11■□□□□ 0.33
CXCL3P19876 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCL3P19876 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCL3P19876 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CXCL3P19876 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCL3P19876 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCL3P19876 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CXCL3P19876 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CXCL3P19876 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCL3P19876 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCL3P19876 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
CXCL3P19876 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CXCL3P19876 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CXCL3P19876 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCL3P19876 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCL3P19876 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.1■□□□□ 0.33
CXCL3P19876 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CXCL3P19876 AL138781.2-201ENST00000617896 1843 ntBASIC17.1■□□□□ 0.33
CXCL3P19876 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCL3P19876 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.1■□□□□ 0.33
CXCL3P19876 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CXCL3P19876 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCL3P19876 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCL3P19876 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.1■□□□□ 0.33
CXCL3P19876 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.1■□□□□ 0.33
CXCL3P19876 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CXCL3P19876 AL034346.1-201ENST00000568244 1277 ntBASIC17.1■□□□□ 0.33
CXCL3P19876 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCL3P19876 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.1■□□□□ 0.33
CXCL3P19876 AC018470.1-201ENST00000624790 3129 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms