Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT4P19013 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT4P19013 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT4P19013 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT4P19013 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT4P19013 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT4P19013 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT4P19013 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT4P19013 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT4P19013 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT4P19013 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
KRT4P19013 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT4P19013 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
KRT4P19013 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT4P19013 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
KRT4P19013 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT4P19013 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT4P19013 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.44■□□□□ 0.86
KRT4P19013 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT4P19013 AC008764.7-201ENST00000593779 1081 ntBASIC20.44■□□□□ 0.86
KRT4P19013 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.44■□□□□ 0.86
KRT4P19013 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT4P19013 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT4P19013 TSPY26P-201ENST00000476365 1326 ntBASIC20.44■□□□□ 0.86
KRT4P19013 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.44■□□□□ 0.86
KRT4P19013 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT4P19013 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT4P19013 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.43■□□□□ 0.86
KRT4P19013 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
KRT4P19013 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT4P19013 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
KRT4P19013 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
KRT4P19013 AL136162.1-201ENST00000607711 1078 ntBASIC20.43■□□□□ 0.86
KRT4P19013 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT4P19013 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
KRT4P19013 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT4P19013 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT4P19013 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KRT4P19013 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
KRT4P19013 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
KRT4P19013 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT4P19013 AL020996.1-203ENST00000536896 2307 ntBASIC20.43■□□□□ 0.86
KRT4P19013 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KRT4P19013 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT4P19013 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.43■□□□□ 0.86
KRT4P19013 AL158211.5-201ENST00000623583 2518 ntBASIC20.43■□□□□ 0.86
KRT4P19013 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT4P19013 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
KRT4P19013 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT4P19013 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
KRT4P19013 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT4P19013 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
KRT4P19013 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.42■□□□□ 0.86
KRT4P19013 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT4P19013 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT4P19013 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT4P19013 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT4P19013 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.42■□□□□ 0.86
KRT4P19013 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
KRT4P19013 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT4P19013 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT4P19013 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT4P19013 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.42■□□□□ 0.86
KRT4P19013 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT4P19013 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT4P19013 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT4P19013 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT4P19013 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
KRT4P19013 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT4P19013 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.41■□□□□ 0.86
KRT4P19013 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
KRT4P19013 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT4P19013 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
KRT4P19013 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT4P19013 AC099791.1-201ENST00000416440 715 ntBASIC20.41■□□□□ 0.86
KRT4P19013 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.41■□□□□ 0.86
KRT4P19013 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT4P19013 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT4P19013 AC135279.3-201ENST00000610945 1311 ntBASIC20.41■□□□□ 0.86
KRT4P19013 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT4P19013 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT4P19013 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
KRT4P19013 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KRT4P19013 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT4P19013 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT4P19013 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.41■□□□□ 0.86
KRT4P19013 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
KRT4P19013 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT4P19013 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT4P19013 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
KRT4P19013 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT4P19013 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT4P19013 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT4P19013 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT4P19013 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT4P19013 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KRT4P19013 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT4P19013 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT4P19013 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT4P19013 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms