Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.99■□□□□ 0.31
ATF4P18848 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATF4P18848 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF4P18848 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ATF4P18848 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ATF4P18848 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF4P18848 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.99■□□□□ 0.31
ATF4P18848 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.99■□□□□ 0.31
ATF4P18848 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.99■□□□□ 0.31
ATF4P18848 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF4P18848 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF4P18848 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF4P18848 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
ATF4P18848 AL049812.1-201ENST00000432563 2267 ntBASIC16.99■□□□□ 0.31
ATF4P18848 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.99■□□□□ 0.31
ATF4P18848 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF4P18848 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.99■□□□□ 0.31
ATF4P18848 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF4P18848 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATF4P18848 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ATF4P18848 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATF4P18848 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.98■□□□□ 0.31
ATF4P18848 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ATF4P18848 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF4P18848 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATF4P18848 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF4P18848 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF4P18848 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATF4P18848 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF4P18848 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
ATF4P18848 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF4P18848 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.98■□□□□ 0.31
ATF4P18848 AC144652.1-201ENST00000609974 1624 ntBASIC16.98■□□□□ 0.31
ATF4P18848 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF4P18848 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
ATF4P18848 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.98■□□□□ 0.31
ATF4P18848 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATF4P18848 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF4P18848 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF4P18848 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 AP000997.3-201ENST00000623333 2250 ntBASIC16.97■□□□□ 0.31
ATF4P18848 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.97■□□□□ 0.31
ATF4P18848 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.97■□□□□ 0.31
ATF4P18848 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
ATF4P18848 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 PCDHB18P-201ENST00000524813 2368 ntBASIC16.97■□□□□ 0.31
ATF4P18848 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
ATF4P18848 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ATF4P18848 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.97■□□□□ 0.31
ATF4P18848 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATF4P18848 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ATF4P18848 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.97■□□□□ 0.31
ATF4P18848 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
ATF4P18848 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 AC005703.6-201ENST00000623265 1329 ntBASIC16.96■□□□□ 0.31
ATF4P18848 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ATF4P18848 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ATF4P18848 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.96■□□□□ 0.31
ATF4P18848 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.96■□□□□ 0.31
ATF4P18848 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.96■□□□□ 0.31
ATF4P18848 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.96■□□□□ 0.31
ATF4P18848 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.96■□□□□ 0.31
ATF4P18848 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.96■□□□□ 0.31
ATF4P18848 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.96■□□□□ 0.31
ATF4P18848 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.96■□□□□ 0.31
ATF4P18848 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.96■□□□□ 0.31
ATF4P18848 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.96■□□□□ 0.31
ATF4P18848 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.96■□□□□ 0.31
ATF4P18848 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATF4P18848 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATF4P18848 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.96■□□□□ 0.3
ATF4P18848 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.96■□□□□ 0.3
ATF4P18848 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms