Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MIR663A-201ENST00000385250 93 ntBASIC20.47■□□□□ 0.87
VCLP18206 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.47■□□□□ 0.87
VCLP18206 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.47■□□□□ 0.87
VCLP18206 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VCLP18206 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
VCLP18206 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.47■□□□□ 0.87
VCLP18206 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.47■□□□□ 0.87
VCLP18206 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VCLP18206 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VCLP18206 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.46■□□□□ 0.87
VCLP18206 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VCLP18206 CNN2P6-201ENST00000439038 900 ntBASIC20.46■□□□□ 0.87
VCLP18206 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VCLP18206 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.46■□□□□ 0.87
VCLP18206 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VCLP18206 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VCLP18206 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.46■□□□□ 0.87
VCLP18206 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VCLP18206 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VCLP18206 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
VCLP18206 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
VCLP18206 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.45■□□□□ 0.86
VCLP18206 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
VCLP18206 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VCLP18206 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VCLP18206 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCLP18206 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VCLP18206 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCLP18206 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
VCLP18206 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.45■□□□□ 0.86
VCLP18206 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
VCLP18206 AL591742.1-201ENST00000604433 565 ntBASIC20.45■□□□□ 0.86
VCLP18206 AC008694.1-202ENST00000636953 945 ntBASIC20.45■□□□□ 0.86
VCLP18206 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCLP18206 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VCLP18206 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCLP18206 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCLP18206 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCLP18206 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VCLP18206 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
VCLP18206 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
VCLP18206 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VCLP18206 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.44■□□□□ 0.86
VCLP18206 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VCLP18206 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCLP18206 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCLP18206 CROCCP5-201ENST00000436658 830 ntBASIC20.44■□□□□ 0.86
VCLP18206 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.44■□□□□ 0.86
VCLP18206 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCLP18206 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.44■□□□□ 0.86
VCLP18206 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.44■□□□□ 0.86
VCLP18206 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.44■□□□□ 0.86
VCLP18206 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCLP18206 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.44■□□□□ 0.86
VCLP18206 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCLP18206 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCLP18206 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCLP18206 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.44■□□□□ 0.86
VCLP18206 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.43■□□□□ 0.86
VCLP18206 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCLP18206 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
VCLP18206 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.43■□□□□ 0.86
VCLP18206 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
VCLP18206 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
VCLP18206 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.43■□□□□ 0.86
VCLP18206 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
VCLP18206 AL162412.1-201ENST00000567129 965 ntBASIC20.43■□□□□ 0.86
VCLP18206 AC069236.1-201ENST00000604339 616 ntBASIC20.43■□□□□ 0.86
VCLP18206 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCLP18206 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.43■□□□□ 0.86
VCLP18206 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCLP18206 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
VCLP18206 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
VCLP18206 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VCLP18206 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
VCLP18206 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VCLP18206 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCLP18206 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCLP18206 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VCLP18206 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VCLP18206 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCLP18206 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCLP18206 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCLP18206 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.42■□□□□ 0.86
VCLP18206 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCLP18206 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCLP18206 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCLP18206 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.42■□□□□ 0.86
VCLP18206 CDV3P1-201ENST00000471403 739 ntBASIC20.42■□□□□ 0.86
VCLP18206 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.42■□□□□ 0.86
VCLP18206 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.42■□□□□ 0.86
VCLP18206 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.42■□□□□ 0.86
VCLP18206 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.42■□□□□ 0.86
VCLP18206 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
VCLP18206 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VCLP18206 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCLP18206 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.42■□□□□ 0.86
VCLP18206 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
VCLP18206 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
VCLP18206 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms