Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.66■■□□□ 1.06
PTPN1P18031 CD99P1-205ENST00000527459 561 ntBASIC21.66■■□□□ 1.06
PTPN1P18031 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.66■■□□□ 1.06
PTPN1P18031 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.66■■□□□ 1.06
PTPN1P18031 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN1P18031 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN1P18031 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTPN1P18031 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
PTPN1P18031 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PTPN1P18031 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.65■■□□□ 1.06
PTPN1P18031 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.65■■□□□ 1.06
PTPN1P18031 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.65■■□□□ 1.06
PTPN1P18031 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.65■■□□□ 1.06
PTPN1P18031 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.65■■□□□ 1.06
PTPN1P18031 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 AC006128.1-201ENST00000624704 1661 ntBASIC21.65■■□□□ 1.06
PTPN1P18031 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTPN1P18031 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PTPN1P18031 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.64■■□□□ 1.06
PTPN1P18031 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.64■■□□□ 1.05
PTPN1P18031 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN1P18031 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN1P18031 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN1P18031 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN1P18031 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN1P18031 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.64■■□□□ 1.05
PTPN1P18031 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.64■■□□□ 1.05
PTPN1P18031 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN1P18031 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PTPN1P18031 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTPN1P18031 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.63■■□□□ 1.05
PTPN1P18031 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.63■■□□□ 1.05
PTPN1P18031 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PTPN1P18031 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PTPN1P18031 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.63■■□□□ 1.05
PTPN1P18031 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.63■■□□□ 1.05
PTPN1P18031 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
PTPN1P18031 C2orf69P4-201ENST00000565394 541 ntBASIC21.63■■□□□ 1.05
PTPN1P18031 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN1P18031 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN1P18031 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
PTPN1P18031 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN1P18031 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN1P18031 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PTPN1P18031 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN1P18031 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN1P18031 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN1P18031 KRT8P36-201ENST00000489121 1440 ntBASIC21.63■■□□□ 1.05
PTPN1P18031 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN1P18031 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PTPN1P18031 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PTPN1P18031 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.62■■□□□ 1.05
PTPN1P18031 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN1P18031 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN1P18031 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.62■■□□□ 1.05
PTPN1P18031 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.62■■□□□ 1.05
PTPN1P18031 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PTPN1P18031 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PTPN1P18031 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN1P18031 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.62■■□□□ 1.05
PTPN1P18031 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PTPN1P18031 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN1P18031 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.61■■□□□ 1.05
PTPN1P18031 AL137060.1-201ENST00000618151 2648 ntBASIC21.61■■□□□ 1.05
PTPN1P18031 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN1P18031 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN1P18031 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN1P18031 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN1P18031 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN1P18031 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.61■■□□□ 1.05
PTPN1P18031 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.61■■□□□ 1.05
PTPN1P18031 RNA5SP413-201ENST00000516373 109 ntBASIC21.61■■□□□ 1.05
PTPN1P18031 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PTPN1P18031 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.61■■□□□ 1.05
PTPN1P18031 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.61■■□□□ 1.05
PTPN1P18031 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.61■■□□□ 1.05
PTPN1P18031 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN1P18031 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN1P18031 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN1P18031 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTPN1P18031 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.6■■□□□ 1.05
PTPN1P18031 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.6■■□□□ 1.05
PTPN1P18031 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PTPN1P18031 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.6■■□□□ 1.05
PTPN1P18031 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.6■■□□□ 1.05
PTPN1P18031 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.6■■□□□ 1.05
PTPN1P18031 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.6■■□□□ 1.05
PTPN1P18031 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.6■■□□□ 1.05
PTPN1P18031 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms