Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.7■■□□□ 1.06
CHRNB2P17787 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRNB2P17787 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CHRNB2P17787 KRT18P11-201ENST00000435214 1283 ntBASIC21.7■■□□□ 1.06
CHRNB2P17787 CNN2P6-201ENST00000439038 900 ntBASIC21.7■■□□□ 1.06
CHRNB2P17787 CDV3P1-201ENST00000471403 739 ntBASIC21.7■■□□□ 1.06
CHRNB2P17787 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.7■■□□□ 1.06
CHRNB2P17787 DUX4L16-201ENST00000555130 1264 ntBASIC21.7■■□□□ 1.06
CHRNB2P17787 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.7■■□□□ 1.06
CHRNB2P17787 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.7■■□□□ 1.06
CHRNB2P17787 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRNB2P17787 AL591742.1-201ENST00000604433 565 ntBASIC21.7■■□□□ 1.06
CHRNB2P17787 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.7■■□□□ 1.06
CHRNB2P17787 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRNB2P17787 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.7■■□□□ 1.06
CHRNB2P17787 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CHRNB2P17787 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRNB2P17787 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.69■■□□□ 1.06
CHRNB2P17787 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNB2P17787 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNB2P17787 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CHRNB2P17787 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNB2P17787 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CHRNB2P17787 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.69■■□□□ 1.06
CHRNB2P17787 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNB2P17787 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.69■■□□□ 1.06
CHRNB2P17787 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.69■■□□□ 1.06
CHRNB2P17787 AC007322.4-201ENST00000509611 723 ntBASIC21.69■■□□□ 1.06
CHRNB2P17787 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.69■■□□□ 1.06
CHRNB2P17787 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.69■■□□□ 1.06
CHRNB2P17787 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNB2P17787 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNB2P17787 AC112907.3-201ENST00000577781 2400 ntBASIC21.69■■□□□ 1.06
CHRNB2P17787 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNB2P17787 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CHRNB2P17787 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNB2P17787 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNB2P17787 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
CHRNB2P17787 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRNB2P17787 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNB2P17787 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNB2P17787 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNB2P17787 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.68■■□□□ 1.06
CHRNB2P17787 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
CHRNB2P17787 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNB2P17787 FAM21FP-204ENST00000608637 956 ntBASIC21.68■■□□□ 1.06
CHRNB2P17787 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.68■■□□□ 1.06
CHRNB2P17787 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.68■■□□□ 1.06
CHRNB2P17787 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNB2P17787 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CHRNB2P17787 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNB2P17787 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNB2P17787 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHRNB2P17787 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.68■■□□□ 1.06
CHRNB2P17787 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
CHRNB2P17787 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNB2P17787 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNB2P17787 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNB2P17787 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNB2P17787 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNB2P17787 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
CHRNB2P17787 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.67■■□□□ 1.06
CHRNB2P17787 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.67■■□□□ 1.06
CHRNB2P17787 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CHRNB2P17787 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNB2P17787 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNB2P17787 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNB2P17787 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNB2P17787 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNB2P17787 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.67■■□□□ 1.06
CHRNB2P17787 AC013268.1-206ENST00000638368 961 ntBASIC21.67■■□□□ 1.06
CHRNB2P17787 AC112229.1-201ENST00000639295 961 ntBASIC21.67■■□□□ 1.06
CHRNB2P17787 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNB2P17787 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHRNB2P17787 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.66■■□□□ 1.06
CHRNB2P17787 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNB2P17787 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNB2P17787 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNB2P17787 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.66■■□□□ 1.06
CHRNB2P17787 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNB2P17787 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.66■■□□□ 1.06
CHRNB2P17787 SMG8-203ENST00000578922 2178 ntBASIC21.66■■□□□ 1.06
CHRNB2P17787 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.66■■□□□ 1.06
CHRNB2P17787 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNB2P17787 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNB2P17787 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CHRNB2P17787 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHRNB2P17787 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.66■■□□□ 1.06
CHRNB2P17787 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.66■■□□□ 1.06
CHRNB2P17787 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.66■■□□□ 1.06
CHRNB2P17787 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.66■■□□□ 1.06
CHRNB2P17787 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.66■■□□□ 1.06
CHRNB2P17787 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNB2P17787 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNB2P17787 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CHRNB2P17787 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNB2P17787 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNB2P17787 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNB2P17787 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHRNB2P17787 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms