Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH1P12830 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH1P12830 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH1P12830 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDH1P12830 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH1P12830 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH1P12830 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH1P12830 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH1P12830 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH1P12830 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH1P12830 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH1P12830 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH1P12830 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CDH1P12830 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDH1P12830 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH1P12830 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH1P12830 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH1P12830 CNN2P6-201ENST00000439038 900 ntBASIC19.87■□□□□ 0.77
CDH1P12830 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH1P12830 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH1P12830 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH1P12830 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH1P12830 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.87■□□□□ 0.77
CDH1P12830 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CDH1P12830 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH1P12830 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH1P12830 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH1P12830 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH1P12830 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH1P12830 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH1P12830 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH1P12830 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH1P12830 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH1P12830 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH1P12830 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH1P12830 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CDH1P12830 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH1P12830 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CDH1P12830 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH1P12830 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH1P12830 AC080038.1-201ENST00000611274 1154 ntBASIC19.86■□□□□ 0.77
CDH1P12830 AC092666.2-201ENST00000613287 246 ntBASIC19.86■□□□□ 0.77
CDH1P12830 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH1P12830 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH1P12830 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH1P12830 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH1P12830 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH1P12830 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH1P12830 GABARAPL3-202ENST00000624044 1851 ntBASIC19.86■□□□□ 0.77
CDH1P12830 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CDH1P12830 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CDH1P12830 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH1P12830 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH1P12830 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH1P12830 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH1P12830 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CDH1P12830 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CDH1P12830 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH1P12830 AC007322.3-201ENST00000426526 701 ntBASIC19.85■□□□□ 0.77
CDH1P12830 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDH1P12830 AC007322.4-201ENST00000509611 723 ntBASIC19.85■□□□□ 0.77
CDH1P12830 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.85■□□□□ 0.77
CDH1P12830 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH1P12830 AL591742.1-201ENST00000604433 565 ntBASIC19.85■□□□□ 0.77
CDH1P12830 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDH1P12830 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH1P12830 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH1P12830 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH1P12830 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH1P12830 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.84■□□□□ 0.77
CDH1P12830 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH1P12830 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CDH1P12830 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH1P12830 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CDH1P12830 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
CDH1P12830 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH1P12830 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH1P12830 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH1P12830 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH1P12830 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH1P12830 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH1P12830 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH1P12830 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH1P12830 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH1P12830 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH1P12830 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH1P12830 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH1P12830 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH1P12830 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH1P12830 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CDH1P12830 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH1P12830 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH1P12830 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH1P12830 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.83■□□□□ 0.77
CDH1P12830 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH1P12830 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.83■□□□□ 0.77
CDH1P12830 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH1P12830 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH1P12830 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
CDH1P12830 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms