Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
UBCP0CG48 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBCP0CG48 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBCP0CG48 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.87■□□□□ 0.45
UBCP0CG48 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBCP0CG48 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
UBCP0CG48 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.86■□□□□ 0.45
UBCP0CG48 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBCP0CG48 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.86■□□□□ 0.45
UBCP0CG48 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.86■□□□□ 0.45
UBCP0CG48 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.86■□□□□ 0.45
UBCP0CG48 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
UBCP0CG48 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 MIR6084-201ENST00000622012 110 ntBASIC17.86■□□□□ 0.45
UBCP0CG48 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.86■□□□□ 0.45
UBCP0CG48 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBCP0CG48 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.86■□□□□ 0.45
UBCP0CG48 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBCP0CG48 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.85■□□□□ 0.45
UBCP0CG48 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.85■□□□□ 0.45
UBCP0CG48 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
UBCP0CG48 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 AC010141.2-201ENST00000452426 721 ntBASIC17.85■□□□□ 0.45
UBCP0CG48 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.85■□□□□ 0.45
UBCP0CG48 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 AC142381.2-201ENST00000566120 298 ntBASIC17.85■□□□□ 0.45
UBCP0CG48 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.85■□□□□ 0.45
UBCP0CG48 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 AL139246.5-201ENST00000606645 996 ntBASIC17.85■□□□□ 0.45
UBCP0CG48 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.85■□□□□ 0.45
UBCP0CG48 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.85■□□□□ 0.45
UBCP0CG48 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.85■□□□□ 0.45
UBCP0CG48 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBCP0CG48 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
UBCP0CG48 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UBCP0CG48 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.84■□□□□ 0.45
UBCP0CG48 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.84■□□□□ 0.45
UBCP0CG48 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.84■□□□□ 0.45
UBCP0CG48 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UBCP0CG48 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
UBCP0CG48 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.84■□□□□ 0.45
UBCP0CG48 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.84■□□□□ 0.45
UBCP0CG48 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.84■□□□□ 0.45
UBCP0CG48 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UBCP0CG48 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
UBCP0CG48 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 AC099778.1-201ENST00000568593 1911 ntBASIC17.84■□□□□ 0.45
UBCP0CG48 AC116050.2-201ENST00000612102 1779 ntBASIC17.84■□□□□ 0.45
UBCP0CG48 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBCP0CG48 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
UBCP0CG48 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.83■□□□□ 0.45
UBCP0CG48 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.83■□□□□ 0.45
UBCP0CG48 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBCP0CG48 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
UBCP0CG48 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.83■□□□□ 0.45
UBCP0CG48 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
UBCP0CG48 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
UBCP0CG48 AC027612.3-201ENST00000413684 1047 ntBASIC17.83■□□□□ 0.44
UBCP0CG48 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.83■□□□□ 0.44
UBCP0CG48 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.83■□□□□ 0.44
UBCP0CG48 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBCP0CG48 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBCP0CG48 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
UBCP0CG48 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
UBCP0CG48 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.83■□□□□ 0.44
UBCP0CG48 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBCP0CG48 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms