Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.27■□□□□ 0.67
RAB40ALP0C0E4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.27■□□□□ 0.67
RAB40ALP0C0E4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 KRT17P3-201ENST00000420566 1262 ntBASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 C2orf69P4-201ENST00000565394 541 ntBASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40ALP0C0E4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAB40ALP0C0E4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB40ALP0C0E4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB40ALP0C0E4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB40ALP0C0E4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms