Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P04436 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04436 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.68■□□□□ 0.58
P04436 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04436 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04436 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.68■□□□□ 0.58
P04436 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04436 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.68■□□□□ 0.58
P04436 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P04436 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P04436 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P04436 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04436 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.68■□□□□ 0.58
P04436 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.68■□□□□ 0.58
P04436 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.68■□□□□ 0.58
P04436 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.68■□□□□ 0.58
P04436 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P04436 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.68■□□□□ 0.58
P04436 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.68■□□□□ 0.58
P04436 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.68■□□□□ 0.58
P04436 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
P04436 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P04436 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.68■□□□□ 0.58
P04436 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04436 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04436 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04436 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04436 ABHD17AP1-201ENST00000358206 933 ntBASIC18.67■□□□□ 0.58
P04436 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04436 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P04436 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04436 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04436 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.67■□□□□ 0.58
P04436 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04436 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.67■□□□□ 0.58
P04436 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04436 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.67■□□□□ 0.58
P04436 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P04436 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.66■□□□□ 0.58
P04436 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.66■□□□□ 0.58
P04436 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.66■□□□□ 0.58
P04436 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.66■□□□□ 0.58
P04436 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 MIR4651-201ENST00000582622 73 ntBASIC18.66■□□□□ 0.58
P04436 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04436 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04436 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04436 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04436 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
P04436 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
P04436 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04436 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04436 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04436 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.65■□□□□ 0.58
P04436 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.65■□□□□ 0.58
P04436 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
P04436 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.65■□□□□ 0.58
P04436 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04436 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.65■□□□□ 0.58
P04436 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P04436 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.65■□□□□ 0.58
P04436 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.65■□□□□ 0.58
P04436 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P04436 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
P04436 AC027702.1-201ENST00000563810 1770 ntBASIC18.65■□□□□ 0.58
P04436 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
P04436 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04436 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
P04436 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
P04436 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
P04436 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04436 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04436 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P04436 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
P04436 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.64■□□□□ 0.57
P04436 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P04436 C2orf69P4-201ENST00000565394 541 ntBASIC18.64■□□□□ 0.57
P04436 AC060766.5-201ENST00000590539 871 ntBASIC18.64■□□□□ 0.57
P04436 HLA-B-256ENST00000639848 1089 ntBASIC18.64■□□□□ 0.57
P04436 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P04436 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04436 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04436 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04436 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.64■□□□□ 0.57
P04436 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04436 AIRN-201ENST00000601203 4374 ntBASIC18.64■□□□□ 0.57
P04436 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
P04436 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms