Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.91■□□□□ 0.3
SFT2D2O95562 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.91■□□□□ 0.3
SFT2D2O95562 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.91■□□□□ 0.3
SFT2D2O95562 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFT2D2O95562 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFT2D2O95562 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SFT2D2O95562 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SFT2D2O95562 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFT2D2O95562 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SFT2D2O95562 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SFT2D2O95562 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.9■□□□□ 0.3
SFT2D2O95562 AC055733.4-201ENST00000638462 1354 ntBASIC16.9■□□□□ 0.3
SFT2D2O95562 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 SYT6-210ENST00000641643 1587 ntBASIC16.9■□□□□ 0.3
SFT2D2O95562 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.9■□□□□ 0.3
SFT2D2O95562 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.9■□□□□ 0.3
SFT2D2O95562 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.9■□□□□ 0.3
SFT2D2O95562 SLC47A1P1-202ENST00000449666 945 ntBASIC16.9■□□□□ 0.3
SFT2D2O95562 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.9■□□□□ 0.3
SFT2D2O95562 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.9■□□□□ 0.3
SFT2D2O95562 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SFT2D2O95562 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.9■□□□□ 0.3
SFT2D2O95562 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFT2D2O95562 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.89■□□□□ 0.29
SFT2D2O95562 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
SFT2D2O95562 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SFT2D2O95562 SRD5A1P1-201ENST00000442297 786 ntBASIC16.89■□□□□ 0.29
SFT2D2O95562 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.89■□□□□ 0.29
SFT2D2O95562 UNC93B8-201ENST00000511903 705 ntBASIC16.89■□□□□ 0.29
SFT2D2O95562 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.89■□□□□ 0.29
SFT2D2O95562 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.89■□□□□ 0.29
SFT2D2O95562 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.89■□□□□ 0.29
SFT2D2O95562 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFT2D2O95562 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 AC009237.3-201ENST00000393279 1427 ntBASIC16.88■□□□□ 0.29
SFT2D2O95562 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.88■□□□□ 0.29
SFT2D2O95562 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SFT2D2O95562 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SFT2D2O95562 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.88■□□□□ 0.29
SFT2D2O95562 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SFT2D2O95562 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.88■□□□□ 0.29
SFT2D2O95562 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.88■□□□□ 0.29
SFT2D2O95562 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.88■□□□□ 0.29
SFT2D2O95562 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.88■□□□□ 0.29
SFT2D2O95562 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.88■□□□□ 0.29
SFT2D2O95562 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.88■□□□□ 0.29
SFT2D2O95562 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SFT2D2O95562 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SFT2D2O95562 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFT2D2O95562 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFT2D2O95562 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SFT2D2O95562 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFT2D2O95562 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFT2D2O95562 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.87■□□□□ 0.29
SFT2D2O95562 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.87■□□□□ 0.29
SFT2D2O95562 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFT2D2O95562 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SFT2D2O95562 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFT2D2O95562 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SFT2D2O95562 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms