Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC30.99■■■□□ 2.55
RAPGEF3O95398 AC006011.2-201ENST00000621313 1158 ntBASIC30.99■■■□□ 2.55
RAPGEF3O95398 COMT-203ENST00000403184 2217 ntTSL 2 BASIC30.99■■■□□ 2.55
RAPGEF3O95398 NBPF21P-201ENST00000425093 1451 ntBASIC30.99■■■□□ 2.55
RAPGEF3O95398 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RAPGEF3O95398 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RAPGEF3O95398 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC30.99■■■□□ 2.55
RAPGEF3O95398 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RAPGEF3O95398 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RAPGEF3O95398 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RAPGEF3O95398 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
RAPGEF3O95398 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RAPGEF3O95398 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC30.98■■■□□ 2.55
RAPGEF3O95398 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RAPGEF3O95398 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC30.98■■■□□ 2.55
RAPGEF3O95398 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RAPGEF3O95398 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC30.98■■■□□ 2.55
RAPGEF3O95398 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
RAPGEF3O95398 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RAPGEF3O95398 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
RAPGEF3O95398 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RAPGEF3O95398 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC30.97■■■□□ 2.55
RAPGEF3O95398 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC30.97■■■□□ 2.55
RAPGEF3O95398 NMU-205ENST00000511469 756 ntTSL 3 BASIC30.97■■■□□ 2.55
RAPGEF3O95398 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC30.97■■■□□ 2.55
RAPGEF3O95398 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC30.97■■■□□ 2.55
RAPGEF3O95398 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
RAPGEF3O95398 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RAPGEF3O95398 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RAPGEF3O95398 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
RAPGEF3O95398 AC124283.5-201ENST00000624661 1809 ntBASIC30.96■■■□□ 2.55
RAPGEF3O95398 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC30.96■■■□□ 2.55
RAPGEF3O95398 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC30.96■■■□□ 2.55
RAPGEF3O95398 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
RAPGEF3O95398 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
RAPGEF3O95398 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
RAPGEF3O95398 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
RAPGEF3O95398 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
RAPGEF3O95398 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
RAPGEF3O95398 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
RAPGEF3O95398 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
RAPGEF3O95398 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.54
RAPGEF3O95398 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC30.95■■■□□ 2.54
RAPGEF3O95398 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RAPGEF3O95398 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
RAPGEF3O95398 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RAPGEF3O95398 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
RAPGEF3O95398 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
RAPGEF3O95398 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC30.94■■■□□ 2.54
RAPGEF3O95398 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC30.94■■■□□ 2.54
RAPGEF3O95398 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RAPGEF3O95398 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC30.94■■■□□ 2.54
RAPGEF3O95398 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC30.93■■■□□ 2.54
RAPGEF3O95398 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC30.93■■■□□ 2.54
RAPGEF3O95398 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
RAPGEF3O95398 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC30.93■■■□□ 2.54
RAPGEF3O95398 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
RAPGEF3O95398 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
RAPGEF3O95398 AL356652.1-201ENST00000615962 565 ntBASIC30.93■■■□□ 2.54
RAPGEF3O95398 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RAPGEF3O95398 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC30.93■■■□□ 2.54
RAPGEF3O95398 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
RAPGEF3O95398 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RAPGEF3O95398 GUK1-204ENST00000366721 689 ntTSL 3 BASIC30.92■■■□□ 2.54
RAPGEF3O95398 UPK3BP1-201ENST00000428678 509 ntBASIC30.92■■■□□ 2.54
RAPGEF3O95398 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC30.92■■■□□ 2.54
RAPGEF3O95398 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC30.92■■■□□ 2.54
RAPGEF3O95398 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
RAPGEF3O95398 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC30.92■■■□□ 2.54
RAPGEF3O95398 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RAPGEF3O95398 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RAPGEF3O95398 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RAPGEF3O95398 PKM-204ENST00000449901 2526 ntTSL 2 BASIC30.91■■■□□ 2.54
RAPGEF3O95398 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RAPGEF3O95398 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RAPGEF3O95398 TPM4P1-201ENST00000436100 807 ntBASIC30.91■■■□□ 2.54
RAPGEF3O95398 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC30.91■■■□□ 2.54
RAPGEF3O95398 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC30.91■■■□□ 2.54
RAPGEF3O95398 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC30.91■■■□□ 2.54
RAPGEF3O95398 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC30.91■■■□□ 2.54
RAPGEF3O95398 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC30.91■■■□□ 2.54
RAPGEF3O95398 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC30.91■■■□□ 2.54
RAPGEF3O95398 LTBR-211ENST00000543190 785 ntTSL 3 BASIC30.91■■■□□ 2.54
RAPGEF3O95398 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC30.91■■■□□ 2.54
RAPGEF3O95398 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
RAPGEF3O95398 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
RAPGEF3O95398 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RAPGEF3O95398 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC30.91■■■□□ 2.54
RAPGEF3O95398 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
RAPGEF3O95398 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RAPGEF3O95398 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
RAPGEF3O95398 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
RAPGEF3O95398 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
RAPGEF3O95398 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
RAPGEF3O95398 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
RAPGEF3O95398 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RAPGEF3O95398 AC116562.2-201ENST00000507042 360 ntBASIC30.9■■■□□ 2.54
RAPGEF3O95398 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC30.9■■■□□ 2.54
RAPGEF3O95398 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC30.9■■■□□ 2.54
RAPGEF3O95398 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC30.9■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms