Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AC010536.3-201ENST00000620306 533 ntBASIC17.72■□□□□ 0.43
XRCC2O43543 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.72■□□□□ 0.43
XRCC2O43543 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
XRCC2O43543 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.72■□□□□ 0.43
XRCC2O43543 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC2O43543 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC2O43543 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC2O43543 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC2O43543 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.71■□□□□ 0.43
XRCC2O43543 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC2O43543 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.71■□□□□ 0.43
XRCC2O43543 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC2O43543 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
XRCC2O43543 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC2O43543 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.71■□□□□ 0.43
XRCC2O43543 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.71■□□□□ 0.43
XRCC2O43543 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.71■□□□□ 0.43
XRCC2O43543 FAM21FP-204ENST00000608637 956 ntBASIC17.71■□□□□ 0.43
XRCC2O43543 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC2O43543 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
XRCC2O43543 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC2O43543 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
XRCC2O43543 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC2O43543 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC2O43543 AC073314.1-201ENST00000568729 2216 ntBASIC17.71■□□□□ 0.43
XRCC2O43543 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
XRCC2O43543 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
XRCC2O43543 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
XRCC2O43543 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC2O43543 AC020907.5-201ENST00000624372 1936 ntBASIC17.7■□□□□ 0.42
XRCC2O43543 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.7■□□□□ 0.42
XRCC2O43543 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC2O43543 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC2O43543 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC2O43543 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.7■□□□□ 0.42
XRCC2O43543 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
XRCC2O43543 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.7■□□□□ 0.42
XRCC2O43543 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC2O43543 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.7■□□□□ 0.42
XRCC2O43543 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.7■□□□□ 0.42
XRCC2O43543 AC016769.1-201ENST00000409132 1010 ntBASIC17.7■□□□□ 0.42
XRCC2O43543 TERF1P5-201ENST00000477545 1207 ntBASIC17.7■□□□□ 0.42
XRCC2O43543 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.7■□□□□ 0.42
XRCC2O43543 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.7■□□□□ 0.42
XRCC2O43543 MIR2861-201ENST00000636310 90 ntBASIC17.7■□□□□ 0.42
XRCC2O43543 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC2O43543 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.7■□□□□ 0.42
XRCC2O43543 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC2O43543 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC2O43543 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC2O43543 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
XRCC2O43543 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
XRCC2O43543 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.7■□□□□ 0.42
XRCC2O43543 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC2O43543 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
XRCC2O43543 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC2O43543 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
XRCC2O43543 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC2O43543 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC2O43543 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC2O43543 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
XRCC2O43543 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC2O43543 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
XRCC2O43543 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC2O43543 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
XRCC2O43543 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.69■□□□□ 0.42
XRCC2O43543 MIR5787-201ENST00000611784 55 ntBASIC17.69■□□□□ 0.42
XRCC2O43543 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.69■□□□□ 0.42
XRCC2O43543 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC2O43543 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC2O43543 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
XRCC2O43543 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.69■□□□□ 0.42
XRCC2O43543 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC2O43543 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC2O43543 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC2O43543 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.68■□□□□ 0.42
XRCC2O43543 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.68■□□□□ 0.42
XRCC2O43543 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.68■□□□□ 0.42
XRCC2O43543 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
XRCC2O43543 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC2O43543 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC2O43543 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.68■□□□□ 0.42
XRCC2O43543 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
XRCC2O43543 AL591742.1-201ENST00000604433 565 ntBASIC17.68■□□□□ 0.42
XRCC2O43543 AC013268.1-206ENST00000638368 961 ntBASIC17.68■□□□□ 0.42
XRCC2O43543 AC112229.1-201ENST00000639295 961 ntBASIC17.68■□□□□ 0.42
XRCC2O43543 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
XRCC2O43543 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC2O43543 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC2O43543 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
XRCC2O43543 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
XRCC2O43543 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.68■□□□□ 0.42
XRCC2O43543 AC092720.2-201ENST00000602388 1665 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms