Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.73■□□□□ 0.91
RIPK2O43353 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.73■□□□□ 0.91
RIPK2O43353 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIPK2O43353 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.72■□□□□ 0.91
RIPK2O43353 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIPK2O43353 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIPK2O43353 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIPK2O43353 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIPK2O43353 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.72■□□□□ 0.91
RIPK2O43353 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.72■□□□□ 0.91
RIPK2O43353 MIR2861-201ENST00000636310 90 ntBASIC20.72■□□□□ 0.91
RIPK2O43353 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIPK2O43353 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.72■□□□□ 0.91
RIPK2O43353 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIPK2O43353 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RIPK2O43353 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIPK2O43353 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIPK2O43353 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIPK2O43353 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIPK2O43353 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIPK2O43353 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RIPK2O43353 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIPK2O43353 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIPK2O43353 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.71■□□□□ 0.91
RIPK2O43353 UNC93B3-201ENST00000308076 687 ntBASIC20.71■□□□□ 0.91
RIPK2O43353 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RIPK2O43353 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RIPK2O43353 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.71■□□□□ 0.91
RIPK2O43353 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIPK2O43353 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RIPK2O43353 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.71■□□□□ 0.91
RIPK2O43353 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIPK2O43353 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIPK2O43353 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.71■□□□□ 0.91
RIPK2O43353 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIPK2O43353 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
RIPK2O43353 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RIPK2O43353 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK2O43353 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.7■□□□□ 0.9
RIPK2O43353 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK2O43353 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK2O43353 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK2O43353 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RIPK2O43353 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK2O43353 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK2O43353 TSPY26P-201ENST00000476365 1326 ntBASIC20.7■□□□□ 0.9
RIPK2O43353 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK2O43353 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RIPK2O43353 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK2O43353 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIPK2O43353 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.7■□□□□ 0.9
RIPK2O43353 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.69■□□□□ 0.9
RIPK2O43353 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.69■□□□□ 0.9
RIPK2O43353 AC024257.2-201ENST00000549699 147 ntBASIC20.69■□□□□ 0.9
RIPK2O43353 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.69■□□□□ 0.9
RIPK2O43353 AP000974.1-201ENST00000623909 2387 ntBASIC20.69■□□□□ 0.9
RIPK2O43353 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RIPK2O43353 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIPK2O43353 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RIPK2O43353 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
RIPK2O43353 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.68■□□□□ 0.9
RIPK2O43353 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.68■□□□□ 0.9
RIPK2O43353 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.68■□□□□ 0.9
RIPK2O43353 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.68■□□□□ 0.9
RIPK2O43353 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RIPK2O43353 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RIPK2O43353 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.68■□□□□ 0.9
RIPK2O43353 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RIPK2O43353 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIPK2O43353 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK2O43353 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIPK2O43353 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
RIPK2O43353 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms