Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.95■□□□□ 0.62
NKX2-8O15522 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-8O15522 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKX2-8O15522 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.95■□□□□ 0.62
NKX2-8O15522 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.94■□□□□ 0.62
NKX2-8O15522 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.94■□□□□ 0.62
NKX2-8O15522 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.94■□□□□ 0.62
NKX2-8O15522 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.94■□□□□ 0.62
NKX2-8O15522 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.94■□□□□ 0.62
NKX2-8O15522 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.94■□□□□ 0.62
NKX2-8O15522 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.94■□□□□ 0.62
NKX2-8O15522 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.94■□□□□ 0.62
NKX2-8O15522 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NKX2-8O15522 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
NKX2-8O15522 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.94■□□□□ 0.62
NKX2-8O15522 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.94■□□□□ 0.62
NKX2-8O15522 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKX2-8O15522 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.93■□□□□ 0.62
NKX2-8O15522 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.93■□□□□ 0.62
NKX2-8O15522 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.93■□□□□ 0.62
NKX2-8O15522 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.93■□□□□ 0.62
NKX2-8O15522 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NKX2-8O15522 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.93■□□□□ 0.62
NKX2-8O15522 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.93■□□□□ 0.62
NKX2-8O15522 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NKX2-8O15522 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NKX2-8O15522 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKX2-8O15522 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NKX2-8O15522 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NKX2-8O15522 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX2-8O15522 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX2-8O15522 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.92■□□□□ 0.62
NKX2-8O15522 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX2-8O15522 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.92■□□□□ 0.62
NKX2-8O15522 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.92■□□□□ 0.62
NKX2-8O15522 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.92■□□□□ 0.62
NKX2-8O15522 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NKX2-8O15522 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.92■□□□□ 0.62
NKX2-8O15522 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKX2-8O15522 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-8O15522 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-8O15522 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
NKX2-8O15522 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NKX2-8O15522 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-8O15522 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-8O15522 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKX2-8O15522 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-8O15522 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-8O15522 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NKX2-8O15522 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.9■□□□□ 0.62
NKX2-8O15522 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-8O15522 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-8O15522 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-8O15522 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKX2-8O15522 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NKX2-8O15522 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.9■□□□□ 0.62
NKX2-8O15522 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.9■□□□□ 0.62
NKX2-8O15522 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.9■□□□□ 0.62
NKX2-8O15522 AC097493.4-201ENST00000641197 219 ntBASIC18.9■□□□□ 0.62
NKX2-8O15522 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms