Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ABCD4O14678 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ABCD4O14678 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ABCD4O14678 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
ABCD4O14678 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ABCD4O14678 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ABCD4O14678 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18■□□□□ 0.47
ABCD4O14678 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ABCD4O14678 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18■□□□□ 0.47
ABCD4O14678 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18■□□□□ 0.47
ABCD4O14678 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ABCD4O14678 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18■□□□□ 0.47
ABCD4O14678 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18■□□□□ 0.47
ABCD4O14678 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ABCD4O14678 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18■□□□□ 0.47
ABCD4O14678 RARRES2P4-201ENST00000514074 484 ntBASIC18■□□□□ 0.47
ABCD4O14678 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18■□□□□ 0.47
ABCD4O14678 KRT18P6-201ENST00000555540 1265 ntBASIC18■□□□□ 0.47
ABCD4O14678 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18■□□□□ 0.47
ABCD4O14678 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
ABCD4O14678 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18■□□□□ 0.47
ABCD4O14678 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18■□□□□ 0.47
ABCD4O14678 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ABCD4O14678 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
ABCD4O14678 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.99■□□□□ 0.47
ABCD4O14678 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ABCD4O14678 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.99■□□□□ 0.47
ABCD4O14678 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 BX276092.2-201ENST00000417668 665 ntBASIC17.99■□□□□ 0.47
ABCD4O14678 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 AC073210.2-201ENST00000430369 194 ntBASIC17.99■□□□□ 0.47
ABCD4O14678 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.99■□□□□ 0.47
ABCD4O14678 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.99■□□□□ 0.47
ABCD4O14678 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ABCD4O14678 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ABCD4O14678 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.99■□□□□ 0.47
ABCD4O14678 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.99■□□□□ 0.47
ABCD4O14678 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.99■□□□□ 0.47
ABCD4O14678 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.99■□□□□ 0.47
ABCD4O14678 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ABCD4O14678 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.98■□□□□ 0.47
ABCD4O14678 AC005229.4-201ENST00000610085 2198 ntBASIC17.98■□□□□ 0.47
ABCD4O14678 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ABCD4O14678 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
ABCD4O14678 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ABCD4O14678 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ABCD4O14678 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ABCD4O14678 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ABCD4O14678 AC091799.1-201ENST00000422823 811 ntBASIC17.98■□□□□ 0.47
ABCD4O14678 CDV3P1-201ENST00000471403 739 ntBASIC17.98■□□□□ 0.47
ABCD4O14678 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.98■□□□□ 0.47
ABCD4O14678 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ABCD4O14678 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ABCD4O14678 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ABCD4O14678 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ABCD4O14678 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ABCD4O14678 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ABCD4O14678 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.98■□□□□ 0.47
ABCD4O14678 AC010980.2-201ENST00000587099 1412 ntBASIC17.98■□□□□ 0.47
ABCD4O14678 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ABCD4O14678 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.98■□□□□ 0.47
ABCD4O14678 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ABCD4O14678 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ABCD4O14678 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ABCD4O14678 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ABCD4O14678 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ABCD4O14678 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ABCD4O14678 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ABCD4O14678 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
ABCD4O14678 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ABCD4O14678 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ABCD4O14678 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ABCD4O14678 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms