Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM1O00151 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM1O00151 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM1O00151 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.39■□□□□ 0.69
PDLIM1O00151 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM1O00151 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM1O00151 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM1O00151 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.39■□□□□ 0.69
PDLIM1O00151 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.38■□□□□ 0.69
PDLIM1O00151 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PDLIM1O00151 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM1O00151 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
PDLIM1O00151 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM1O00151 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.38■□□□□ 0.69
PDLIM1O00151 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PDLIM1O00151 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PDLIM1O00151 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM1O00151 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM1O00151 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.38■□□□□ 0.69
PDLIM1O00151 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM1O00151 AL034346.1-201ENST00000568244 1277 ntBASIC19.38■□□□□ 0.69
PDLIM1O00151 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PDLIM1O00151 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.38■□□□□ 0.69
PDLIM1O00151 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.38■□□□□ 0.69
PDLIM1O00151 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PDLIM1O00151 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM1O00151 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.37■□□□□ 0.69
PDLIM1O00151 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PDLIM1O00151 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDLIM1O00151 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.37■□□□□ 0.69
PDLIM1O00151 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM1O00151 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM1O00151 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDLIM1O00151 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM1O00151 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.37■□□□□ 0.69
PDLIM1O00151 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.37■□□□□ 0.69
PDLIM1O00151 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PDLIM1O00151 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.37■□□□□ 0.69
PDLIM1O00151 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM1O00151 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM1O00151 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PDLIM1O00151 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM1O00151 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.37■□□□□ 0.69
PDLIM1O00151 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM1O00151 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM1O00151 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM1O00151 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM1O00151 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PDLIM1O00151 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM1O00151 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM1O00151 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM1O00151 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM1O00151 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM1O00151 AC010141.3-201ENST00000456659 717 ntBASIC19.36■□□□□ 0.69
PDLIM1O00151 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.36■□□□□ 0.69
PDLIM1O00151 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.36■□□□□ 0.69
PDLIM1O00151 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM1O00151 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM1O00151 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDLIM1O00151 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PDLIM1O00151 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.36■□□□□ 0.69
PDLIM1O00151 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM1O00151 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM1O00151 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PDLIM1O00151 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.35■□□□□ 0.69
PDLIM1O00151 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM1O00151 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PDLIM1O00151 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.35■□□□□ 0.69
PDLIM1O00151 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PDLIM1O00151 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.35■□□□□ 0.69
PDLIM1O00151 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.35■□□□□ 0.69
PDLIM1O00151 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PDLIM1O00151 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.35■□□□□ 0.69
PDLIM1O00151 AC087239.1-201ENST00000622671 572 ntBASIC19.35■□□□□ 0.69
PDLIM1O00151 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
PDLIM1O00151 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.35■□□□□ 0.69
PDLIM1O00151 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM1O00151 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDLIM1O00151 FP700111.2-201ENST00000619190 1892 ntBASIC19.35■□□□□ 0.69
PDLIM1O00151 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.35■□□□□ 0.69
PDLIM1O00151 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.34■□□□□ 0.69
PDLIM1O00151 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.34■□□□□ 0.69
PDLIM1O00151 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 AC116562.4-201ENST00000641316 2276 ntBASIC19.34■□□□□ 0.69
PDLIM1O00151 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 AP005435.1-201ENST00000529293 1178 ntBASIC19.34■□□□□ 0.69
PDLIM1O00151 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
PDLIM1O00151 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDLIM1O00151 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms