Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CCDC188H7C350 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC188H7C350 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC188H7C350 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC188H7C350 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC188H7C350 AC027682.1-201ENST00000562846 899 ntBASIC21.21■□□□□ 0.99
CCDC188H7C350 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CCDC188H7C350 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC188H7C350 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC188H7C350 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC188H7C350 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC188H7C350 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC188H7C350 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
CCDC188H7C350 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC188H7C350 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC188H7C350 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC188H7C350 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC188H7C350 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC188H7C350 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC188H7C350 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 AC245052.3-201ENST00000450182 901 ntBASIC21.2■□□□□ 0.98
CCDC188H7C350 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC188H7C350 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC188H7C350 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC188H7C350 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC188H7C350 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC188H7C350 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC188H7C350 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CCDC188H7C350 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC188H7C350 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC188H7C350 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC188H7C350 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC188H7C350 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC188H7C350 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC188H7C350 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CCDC188H7C350 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC188H7C350 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC188H7C350 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC188H7C350 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC188H7C350 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC188H7C350 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC188H7C350 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC188H7C350 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.19■□□□□ 0.98
CCDC188H7C350 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC188H7C350 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC188H7C350 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.19■□□□□ 0.98
CCDC188H7C350 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC188H7C350 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC188H7C350 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC188H7C350 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC188H7C350 KRT16P2-201ENST00000414673 1423 ntBASIC21.19■□□□□ 0.98
CCDC188H7C350 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC188H7C350 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCDC188H7C350 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC188H7C350 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC188H7C350 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC188H7C350 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC188H7C350 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC188H7C350 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC188H7C350 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC188H7C350 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC188H7C350 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC188H7C350 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC188H7C350 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC188H7C350 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC188H7C350 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC188H7C350 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC188H7C350 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC188H7C350 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCDC188H7C350 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC188H7C350 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC188H7C350 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC188H7C350 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC188H7C350 AC116050.2-201ENST00000612102 1779 ntBASIC21.17■□□□□ 0.98
CCDC188H7C350 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC188H7C350 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC188H7C350 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCDC188H7C350 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC188H7C350 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC188H7C350 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC188H7C350 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC188H7C350 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC188H7C350 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CCDC188H7C350 AL158211.5-201ENST00000623583 2518 ntBASIC21.16■□□□□ 0.98
CCDC188H7C350 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCDC188H7C350 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC188H7C350 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC188H7C350 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms