Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.85□□□□□ -0.03
NACAE9PAV3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.85□□□□□ -0.03
NACAE9PAV3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NACAE9PAV3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
NACAE9PAV3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 AC006015.1-201ENST00000429970 570 ntBASIC14.84□□□□□ -0.03
NACAE9PAV3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.84□□□□□ -0.03
NACAE9PAV3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.84□□□□□ -0.03
NACAE9PAV3 AC138907.5-202ENST00000569484 235 ntBASIC14.84□□□□□ -0.03
NACAE9PAV3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NACAE9PAV3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.84□□□□□ -0.03
NACAE9PAV3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.84□□□□□ -0.03
NACAE9PAV3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NACAE9PAV3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NACAE9PAV3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 AL121603.2-201ENST00000557373 2117 ntBASIC14.84□□□□□ -0.03
NACAE9PAV3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NACAE9PAV3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
NACAE9PAV3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.83□□□□□ -0.03
NACAE9PAV3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NACAE9PAV3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NACAE9PAV3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NACAE9PAV3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.83□□□□□ -0.03
NACAE9PAV3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NACAE9PAV3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
NACAE9PAV3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.83□□□□□ -0.03
NACAE9PAV3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
NACAE9PAV3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
NACAE9PAV3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.83□□□□□ -0.03
NACAE9PAV3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
NACAE9PAV3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NACAE9PAV3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
NACAE9PAV3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NACAE9PAV3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NACAE9PAV3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.83□□□□□ -0.04
NACAE9PAV3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NACAE9PAV3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.83□□□□□ -0.04
NACAE9PAV3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.83□□□□□ -0.04
NACAE9PAV3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NACAE9PAV3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NACAE9PAV3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
NACAE9PAV3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NACAE9PAV3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NACAE9PAV3 MIR663A-201ENST00000385250 93 ntBASIC14.83□□□□□ -0.04
NACAE9PAV3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.83□□□□□ -0.04
NACAE9PAV3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.83□□□□□ -0.04
NACAE9PAV3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.83□□□□□ -0.04
NACAE9PAV3 AC104187.1-201ENST00000607510 612 ntBASIC14.83□□□□□ -0.04
NACAE9PAV3 AC073111.5-205ENST00000641717 521 ntBASIC14.83□□□□□ -0.04
NACAE9PAV3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
NACAE9PAV3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NACAE9PAV3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.83□□□□□ -0.04
NACAE9PAV3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NACAE9PAV3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NACAE9PAV3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.82□□□□□ -0.04
NACAE9PAV3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.82□□□□□ -0.04
NACAE9PAV3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.82□□□□□ -0.04
NACAE9PAV3 AC026185.1-201ENST00000445748 174 ntBASIC14.82□□□□□ -0.04
NACAE9PAV3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.82□□□□□ -0.04
NACAE9PAV3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NACAE9PAV3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NACAE9PAV3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NACAE9PAV3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.81□□□□□ -0.04
NACAE9PAV3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NACAE9PAV3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.81□□□□□ -0.04
NACAE9PAV3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NACAE9PAV3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NACAE9PAV3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NACAE9PAV3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NACAE9PAV3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NACAE9PAV3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NACAE9PAV3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.81□□□□□ -0.04
NACAE9PAV3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.81□□□□□ -0.04
NACAE9PAV3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.81□□□□□ -0.04
NACAE9PAV3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.81□□□□□ -0.04
NACAE9PAV3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NACAE9PAV3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms