Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 CD72-202ENST00000378430 585 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 AC103724.3-201ENST00000564481 992 ntBASIC14.49□□□□□ -0.09
LINC01549A6NIU2 NTF6A-201ENST00000591175 560 ntBASIC14.49□□□□□ -0.09
LINC01549A6NIU2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01549A6NIU2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01549A6NIU2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 AL031848.2-201ENST00000607670 837 ntBASIC14.47□□□□□ -0.09
LINC01549A6NIU2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
LINC01549A6NIU2 AC116562.4-201ENST00000641316 2276 ntBASIC14.46□□□□□ -0.09
LINC01549A6NIU2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01549A6NIU2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
LINC01549A6NIU2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01549A6NIU2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01549A6NIU2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01549A6NIU2 TNXA-203ENST00000507684 2038 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms