Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 GABARAPL3-202ENST00000624044 1851 ntBASIC20.37■□□□□ 0.85
CCDC189A1A4V9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 LTB4R2-202ENST00000528054 3092 ntBASIC20.37■□□□□ 0.85
CCDC189A1A4V9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CCDC189A1A4V9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 AC005837.3-201ENST00000612163 286 ntBASIC20.36■□□□□ 0.85
CCDC189A1A4V9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CCDC189A1A4V9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 AC061975.6-201ENST00000579045 1553 ntBASIC20.35■□□□□ 0.85
CCDC189A1A4V9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCDC189A1A4V9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 AC120498.10-201ENST00000621827 505 ntBASIC20.34■□□□□ 0.85
CCDC189A1A4V9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 AC073314.1-201ENST00000568729 2216 ntBASIC20.34■□□□□ 0.85
CCDC189A1A4V9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC189A1A4V9 LINC02228-203ENST00000641970 1355 ntBASIC20.34■□□□□ 0.85
CCDC189A1A4V9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC189A1A4V9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC189A1A4V9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC189A1A4V9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC189A1A4V9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC189A1A4V9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC189A1A4V9 AC123595.1-201ENST00000440769 1046 ntBASIC20.33■□□□□ 0.85
CCDC189A1A4V9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC189A1A4V9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC189A1A4V9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC189A1A4V9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC189A1A4V9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC189A1A4V9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 NOC2LP1-202ENST00000452600 2235 ntBASIC20.32■□□□□ 0.84
CCDC189A1A4V9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC189A1A4V9 AP005212.1-201ENST00000581547 1997 ntBASIC20.32■□□□□ 0.84
CCDC189A1A4V9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms