Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV4S1A1TA0A5B7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 GABARAPL3-202ENST00000624044 1851 ntBASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.38■□□□□ 0.21
TCRBV4S1A1TA0A5B7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AC133552.2-202ENST00000575694 574 ntBASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV4S1A1TA0A5B7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AL121603.2-201ENST00000557373 2117 ntBASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AC142086.2-201ENST00000569753 217 ntBASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AC069236.1-201ENST00000604339 616 ntBASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 PLK5-205ENST00000642079 1969 ntBASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 KRT16P2-201ENST00000414673 1423 ntBASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRBV4S1A1TA0A5B7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms