Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGKV3D-20A0A0C4DH25 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGKV3D-20A0A0C4DH25 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 AC061975.6-201ENST00000579045 1553 ntBASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 AP004607.4-201ENST00000530158 1459 ntBASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 AC053503.5-201ENST00000601508 636 ntBASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 AL136162.1-201ENST00000607711 1078 ntBASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IGKV3D-20A0A0C4DH25 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 AC008764.7-201ENST00000593779 1081 ntBASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 TSPY26P-201ENST00000476365 1326 ntBASIC15.15■□□□□ 0.02
IGKV3D-20A0A0C4DH25 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 AC135279.3-201ENST00000610945 1311 ntBASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IGKV3D-20A0A0C4DH25 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 AC092720.2-201ENST00000602388 1665 ntBASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
IGKV3D-20A0A0C4DH25 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms