Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 AC105020.6-201ENST00000621523 1217 ntBASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV25A0A0B4J276 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 AC006128.1-201ENST00000624704 1661 ntBASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV25A0A0B4J276 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 AL355802.2-201ENST00000402069 882 ntBASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 AL355472.2-201ENST00000422958 438 ntBASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 AC069152.1-201ENST00000438030 544 ntBASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV25A0A0B4J276 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV25A0A0B4J276 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV25A0A0B4J276 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TRAV25A0A0B4J276 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
TRAV25A0A0B4J276 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV25A0A0B4J276 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV25A0A0B4J276 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.33■□□□□ 0.04
TRAV25A0A0B4J276 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms