Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 TERF1P2-201ENST00000583350 1212 ntBASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV3A0A0B4J244 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 MIR2861-201ENST00000636310 90 ntBASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 SMG8-203ENST00000578922 2178 ntBASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV3A0A0B4J244 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 AC004854.2-201ENST00000608450 1441 ntBASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 AC123595.1-201ENST00000440769 1046 ntBASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 CCDC92B-201ENST00000575506 885 ntBASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV3A0A0B4J244 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
TRAV3A0A0B4J244 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 YBX1P1-201ENST00000445822 960 ntBASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV3A0A0B4J244 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV3A0A0B4J244 KRT18P14-201ENST00000534205 1250 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms