Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 RARRES2P10-201ENST00000564312 460 ntBASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCDC187A0A096LP49 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC187A0A096LP49 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC187A0A096LP49 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC187A0A096LP49 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CCDC187A0A096LP49 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC187A0A096LP49 PRKY-204ENST00000533551 1019 ntBASIC19.41■□□□□ 0.7
CCDC187A0A096LP49 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC187A0A096LP49 AC113410.3-201ENST00000623366 203 ntBASIC19.41■□□□□ 0.7
CCDC187A0A096LP49 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC187A0A096LP49 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC187A0A096LP49 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC187A0A096LP49 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC187A0A096LP49 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC187A0A096LP49 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 AC010331.1-201ENST00000611423 582 ntBASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC187A0A096LP49 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC187A0A096LP49 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC187A0A096LP49 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC187A0A096LP49 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 KRT18P21-201ENST00000515767 1272 ntBASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC187A0A096LP49 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC187A0A096LP49 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms