Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01558Q9Y6Z2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01558Q9Y6Z2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01558Q9Y6Z2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01558Q9Y6Z2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LINC01558Q9Y6Z2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LINC01558Q9Y6Z2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01558Q9Y6Z2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01558Q9Y6Z2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01558Q9Y6Z2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LINC01558Q9Y6Z2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC01558Q9Y6Z2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01558Q9Y6Z2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01558Q9Y6Z2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01558Q9Y6Z2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01558Q9Y6Z2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01558Q9Y6Z2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01558Q9Y6Z2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01558Q9Y6Z2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC01558Q9Y6Z2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC01558Q9Y6Z2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01558Q9Y6Z2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01558Q9Y6Z2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LINC01558Q9Y6Z2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC13.9□□□□□ -0.19
LINC01558Q9Y6Z2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LINC01558Q9Y6Z2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01558Q9Y6Z2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01558Q9Y6Z2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01558Q9Y6Z2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01558Q9Y6Z2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC01558Q9Y6Z2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01558Q9Y6Z2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01558Q9Y6Z2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01558Q9Y6Z2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01558Q9Y6Z2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01558Q9Y6Z2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01558Q9Y6Z2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01558Q9Y6Z2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01558Q9Y6Z2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01558Q9Y6Z2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01558Q9Y6Z2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01558Q9Y6Z2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01558Q9Y6Z2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01558Q9Y6Z2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01558Q9Y6Z2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC01558Q9Y6Z2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01558Q9Y6Z2 AL449106.1-201ENST00000608517 1980 ntBASIC13.85□□□□□ -0.19
LINC01558Q9Y6Z2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01558Q9Y6Z2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01558Q9Y6Z2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01558Q9Y6Z2 AC093323.1-202ENST00000635031 2045 ntBASIC13.85□□□□□ -0.19
LINC01558Q9Y6Z2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LINC01558Q9Y6Z2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01558Q9Y6Z2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01558Q9Y6Z2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01558Q9Y6Z2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01558Q9Y6Z2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01558Q9Y6Z2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01558Q9Y6Z2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01558Q9Y6Z2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01558Q9Y6Z2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01558Q9Y6Z2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01558Q9Y6Z2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01558Q9Y6Z2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01558Q9Y6Z2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01558Q9Y6Z2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01558Q9Y6Z2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01558Q9Y6Z2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01558Q9Y6Z2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LINC01558Q9Y6Z2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01558Q9Y6Z2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01558Q9Y6Z2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01558Q9Y6Z2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01558Q9Y6Z2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC01558Q9Y6Z2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01558Q9Y6Z2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01558Q9Y6Z2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC01558Q9Y6Z2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01558Q9Y6Z2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01558Q9Y6Z2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01558Q9Y6Z2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01558Q9Y6Z2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01558Q9Y6Z2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01558Q9Y6Z2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC01558Q9Y6Z2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC01558Q9Y6Z2 LINC00543-201ENST00000567234 1845 ntBASIC13.78□□□□□ -0.2
LINC01558Q9Y6Z2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01558Q9Y6Z2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC01558Q9Y6Z2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01558Q9Y6Z2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01558Q9Y6Z2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC01558Q9Y6Z2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
LINC01558Q9Y6Z2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC01558Q9Y6Z2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC01558Q9Y6Z2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01558Q9Y6Z2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01558Q9Y6Z2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01558Q9Y6Z2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LINC01558Q9Y6Z2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01558Q9Y6Z2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms