Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
TNFRSF11AQ9Y6Q6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
TNFRSF11AQ9Y6Q6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TNFRSF11AQ9Y6Q6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
TNFRSF11AQ9Y6Q6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TNFRSF11AQ9Y6Q6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
TNFRSF11AQ9Y6Q6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.57■■■□□ 2.8
TNFRSF11AQ9Y6Q6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.56■■■□□ 2.8
TNFRSF11AQ9Y6Q6 AL135925.1-201ENST00000605920 1701 ntBASIC32.56■■■□□ 2.8
TNFRSF11AQ9Y6Q6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
TNFRSF11AQ9Y6Q6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
TNFRSF11AQ9Y6Q6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
TNFRSF11AQ9Y6Q6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
TNFRSF11AQ9Y6Q6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.54■■■□□ 2.8
TNFRSF11AQ9Y6Q6 AC010864.1-201ENST00000609407 1511 ntBASIC32.54■■■□□ 2.8
TNFRSF11AQ9Y6Q6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.53■■■□□ 2.8
TNFRSF11AQ9Y6Q6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
TNFRSF11AQ9Y6Q6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
TNFRSF11AQ9Y6Q6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC32.51■■■□□ 2.79
TNFRSF11AQ9Y6Q6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
TNFRSF11AQ9Y6Q6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC32.49■■■□□ 2.79
TNFRSF11AQ9Y6Q6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TNFRSF11AQ9Y6Q6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
TNFRSF11AQ9Y6Q6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.48■■■□□ 2.79
TNFRSF11AQ9Y6Q6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.47■■■□□ 2.79
TNFRSF11AQ9Y6Q6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
TNFRSF11AQ9Y6Q6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
TNFRSF11AQ9Y6Q6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
TNFRSF11AQ9Y6Q6 AC108673.1-201ENST00000510422 1159 ntBASIC32.43■■■□□ 2.78
TNFRSF11AQ9Y6Q6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
TNFRSF11AQ9Y6Q6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.42■■■□□ 2.78
TNFRSF11AQ9Y6Q6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.41■■■□□ 2.78
TNFRSF11AQ9Y6Q6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
TNFRSF11AQ9Y6Q6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
TNFRSF11AQ9Y6Q6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
TNFRSF11AQ9Y6Q6 ST7-AS1-201ENST00000456775 1889 ntBASIC32.4■■■□□ 2.78
TNFRSF11AQ9Y6Q6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
TNFRSF11AQ9Y6Q6 AC021231.2-201ENST00000594613 730 ntBASIC32.4■■■□□ 2.78
TNFRSF11AQ9Y6Q6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.4■■■□□ 2.78
TNFRSF11AQ9Y6Q6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.4■■■□□ 2.78
TNFRSF11AQ9Y6Q6 ABHD17AP4-201ENST00000411545 909 ntBASIC32.39■■■□□ 2.78
TNFRSF11AQ9Y6Q6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
TNFRSF11AQ9Y6Q6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.37■■■□□ 2.77
TNFRSF11AQ9Y6Q6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.37■■■□□ 2.77
TNFRSF11AQ9Y6Q6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
TNFRSF11AQ9Y6Q6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.36■■■□□ 2.77
TNFRSF11AQ9Y6Q6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.36■■■□□ 2.77
TNFRSF11AQ9Y6Q6 ABCB10P1-201ENST00000614297 2181 ntBASIC32.35■■■□□ 2.77
TNFRSF11AQ9Y6Q6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
TNFRSF11AQ9Y6Q6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
TNFRSF11AQ9Y6Q6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
TNFRSF11AQ9Y6Q6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.33■■■□□ 2.77
TNFRSF11AQ9Y6Q6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
TNFRSF11AQ9Y6Q6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.33■■■□□ 2.77
TNFRSF11AQ9Y6Q6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
TNFRSF11AQ9Y6Q6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
TNFRSF11AQ9Y6Q6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
TNFRSF11AQ9Y6Q6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.31■■■□□ 2.76
TNFRSF11AQ9Y6Q6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.31■■■□□ 2.76
TNFRSF11AQ9Y6Q6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
TNFRSF11AQ9Y6Q6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
TNFRSF11AQ9Y6Q6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
TNFRSF11AQ9Y6Q6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
TNFRSF11AQ9Y6Q6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.29■■■□□ 2.76
TNFRSF11AQ9Y6Q6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
TNFRSF11AQ9Y6Q6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC32.28■■■□□ 2.76
TNFRSF11AQ9Y6Q6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.28■■■□□ 2.76
TNFRSF11AQ9Y6Q6 DUX4L29-201ENST00000425409 679 ntBASIC32.27■■■□□ 2.76
TNFRSF11AQ9Y6Q6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
TNFRSF11AQ9Y6Q6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
TNFRSF11AQ9Y6Q6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32.26■■■□□ 2.75
TNFRSF11AQ9Y6Q6 ZNRF2P2-203ENST00000454624 420 ntBASIC32.25■■■□□ 2.75
TNFRSF11AQ9Y6Q6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.25■■■□□ 2.75
TNFRSF11AQ9Y6Q6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
TNFRSF11AQ9Y6Q6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TNFRSF11AQ9Y6Q6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TNFRSF11AQ9Y6Q6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.23■■■□□ 2.75
TNFRSF11AQ9Y6Q6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TNFRSF11AQ9Y6Q6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.22■■■□□ 2.75
TNFRSF11AQ9Y6Q6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
TNFRSF11AQ9Y6Q6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
TNFRSF11AQ9Y6Q6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.74
TNFRSF11AQ9Y6Q6 AC127502.1-201ENST00000399971 1502 ntBASIC32.2■■■□□ 2.74
TNFRSF11AQ9Y6Q6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
TNFRSF11AQ9Y6Q6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
TNFRSF11AQ9Y6Q6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.19■■■□□ 2.74
TNFRSF11AQ9Y6Q6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.19■■■□□ 2.74
TNFRSF11AQ9Y6Q6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
TNFRSF11AQ9Y6Q6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
TNFRSF11AQ9Y6Q6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
TNFRSF11AQ9Y6Q6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.18■■■□□ 2.74
TNFRSF11AQ9Y6Q6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
TNFRSF11AQ9Y6Q6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.17■■■□□ 2.74
TNFRSF11AQ9Y6Q6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.16■■■□□ 2.74
TNFRSF11AQ9Y6Q6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
TNFRSF11AQ9Y6Q6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
TNFRSF11AQ9Y6Q6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
TNFRSF11AQ9Y6Q6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
TNFRSF11AQ9Y6Q6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
TNFRSF11AQ9Y6Q6 MIR7108-201ENST00000614319 87 ntBASIC32.14■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms