Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
MKRN1Q9UHC7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
MKRN1Q9UHC7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.23■■■□□ 2.75
MKRN1Q9UHC7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.23■■■□□ 2.75
MKRN1Q9UHC7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
MKRN1Q9UHC7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
MKRN1Q9UHC7 AC108673.1-201ENST00000510422 1159 ntBASIC32.2■■■□□ 2.75
MKRN1Q9UHC7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
MKRN1Q9UHC7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
MKRN1Q9UHC7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.19■■■□□ 2.74
MKRN1Q9UHC7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
MKRN1Q9UHC7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC32.18■■■□□ 2.74
MKRN1Q9UHC7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.17■■■□□ 2.74
MKRN1Q9UHC7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
MKRN1Q9UHC7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.15■■■□□ 2.74
MKRN1Q9UHC7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
MKRN1Q9UHC7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
MKRN1Q9UHC7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC32.13■■■□□ 2.73
MKRN1Q9UHC7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
MKRN1Q9UHC7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
MKRN1Q9UHC7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.12■■■□□ 2.73
MKRN1Q9UHC7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
MKRN1Q9UHC7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
MKRN1Q9UHC7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
MKRN1Q9UHC7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.11■■■□□ 2.73
MKRN1Q9UHC7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
MKRN1Q9UHC7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
MKRN1Q9UHC7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
MKRN1Q9UHC7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
MKRN1Q9UHC7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
MKRN1Q9UHC7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
MKRN1Q9UHC7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
MKRN1Q9UHC7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.08■■■□□ 2.73
MKRN1Q9UHC7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.08■■■□□ 2.73
MKRN1Q9UHC7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
MKRN1Q9UHC7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
MKRN1Q9UHC7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
MKRN1Q9UHC7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
MKRN1Q9UHC7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
MKRN1Q9UHC7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
MKRN1Q9UHC7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.06■■■□□ 2.72
MKRN1Q9UHC7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.06■■■□□ 2.72
MKRN1Q9UHC7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
MKRN1Q9UHC7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
MKRN1Q9UHC7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
MKRN1Q9UHC7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.05■■■□□ 2.72
MKRN1Q9UHC7 GPX1-201ENST00000419349 1106 ntBASIC32.02■■■□□ 2.72
MKRN1Q9UHC7 AC012354.3-201ENST00000623734 483 ntBASIC32.02■■■□□ 2.72
MKRN1Q9UHC7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
MKRN1Q9UHC7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32■■■□□ 2.71
MKRN1Q9UHC7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
MKRN1Q9UHC7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
MKRN1Q9UHC7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.99■■■□□ 2.71
MKRN1Q9UHC7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
MKRN1Q9UHC7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.99■■■□□ 2.71
MKRN1Q9UHC7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
MKRN1Q9UHC7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
MKRN1Q9UHC7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
MKRN1Q9UHC7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
MKRN1Q9UHC7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
MKRN1Q9UHC7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
MKRN1Q9UHC7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
MKRN1Q9UHC7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.98■■■□□ 2.71
MKRN1Q9UHC7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
MKRN1Q9UHC7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.97■■■□□ 2.71
MKRN1Q9UHC7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
MKRN1Q9UHC7 RNF126P1-201ENST00000567452 1320 ntBASIC31.97■■■□□ 2.71
MKRN1Q9UHC7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 DUX4L13-201ENST00000554103 1267 ntBASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 DUX4L15-201ENST00000611059 1267 ntBASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 DUX4L23-201ENST00000615195 1269 ntBASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 DUX4L24-201ENST00000617576 1269 ntBASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 DUX4L22-201ENST00000618238 1269 ntBASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 DUX4L20-201ENST00000619712 1269 ntBASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 DUX4L21-201ENST00000622058 1269 ntBASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 DUX4L10-201ENST00000622460 1267 ntBASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 DUX4L25-201ENST00000624915 1269 ntBASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
MKRN1Q9UHC7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
MKRN1Q9UHC7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.94■■■□□ 2.7
MKRN1Q9UHC7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.94■■■□□ 2.7
MKRN1Q9UHC7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
MKRN1Q9UHC7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
MKRN1Q9UHC7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.93■■■□□ 2.7
MKRN1Q9UHC7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
MKRN1Q9UHC7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
MKRN1Q9UHC7 NTF6A-201ENST00000591175 560 ntBASIC31.92■■■□□ 2.7
MKRN1Q9UHC7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
MKRN1Q9UHC7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
MKRN1Q9UHC7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.89■■■□□ 2.7
MKRN1Q9UHC7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
MKRN1Q9UHC7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.89■■■□□ 2.7
MKRN1Q9UHC7 AC018358.1-201ENST00000631079 1402 ntBASIC31.88■■■□□ 2.69
MKRN1Q9UHC7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
MKRN1Q9UHC7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
MKRN1Q9UHC7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
MKRN1Q9UHC7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
MKRN1Q9UHC7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.85■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms