Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 DUX4L13-201ENST00000554103 1267 ntBASIC30.84■■■□□ 2.53
EFCC1Q9HA90 DUX4L15-201ENST00000611059 1267 ntBASIC30.84■■■□□ 2.53
EFCC1Q9HA90 DUX4L23-201ENST00000615195 1269 ntBASIC30.84■■■□□ 2.53
EFCC1Q9HA90 DUX4L24-201ENST00000617576 1269 ntBASIC30.84■■■□□ 2.53
EFCC1Q9HA90 DUX4L22-201ENST00000618238 1269 ntBASIC30.84■■■□□ 2.53
EFCC1Q9HA90 DUX4L20-201ENST00000619712 1269 ntBASIC30.84■■■□□ 2.53
EFCC1Q9HA90 DUX4L21-201ENST00000622058 1269 ntBASIC30.84■■■□□ 2.53
EFCC1Q9HA90 DUX4L10-201ENST00000622460 1267 ntBASIC30.84■■■□□ 2.53
EFCC1Q9HA90 DUX4L25-201ENST00000624915 1269 ntBASIC30.84■■■□□ 2.53
EFCC1Q9HA90 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
EFCC1Q9HA90 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
EFCC1Q9HA90 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.83■■■□□ 2.53
EFCC1Q9HA90 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
EFCC1Q9HA90 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
EFCC1Q9HA90 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
EFCC1Q9HA90 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
EFCC1Q9HA90 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.81■■■□□ 2.52
EFCC1Q9HA90 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.81■■■□□ 2.52
EFCC1Q9HA90 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
EFCC1Q9HA90 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
EFCC1Q9HA90 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
EFCC1Q9HA90 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.79■■■□□ 2.52
EFCC1Q9HA90 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
EFCC1Q9HA90 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
EFCC1Q9HA90 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
EFCC1Q9HA90 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
EFCC1Q9HA90 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
EFCC1Q9HA90 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
EFCC1Q9HA90 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.77■■■□□ 2.52
EFCC1Q9HA90 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.76■■■□□ 2.51
EFCC1Q9HA90 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.76■■■□□ 2.51
EFCC1Q9HA90 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
EFCC1Q9HA90 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.75■■■□□ 2.51
EFCC1Q9HA90 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.74■■■□□ 2.51
EFCC1Q9HA90 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
EFCC1Q9HA90 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
EFCC1Q9HA90 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.73■■■□□ 2.51
EFCC1Q9HA90 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
EFCC1Q9HA90 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
EFCC1Q9HA90 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
EFCC1Q9HA90 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
EFCC1Q9HA90 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
EFCC1Q9HA90 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
EFCC1Q9HA90 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
EFCC1Q9HA90 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
EFCC1Q9HA90 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
EFCC1Q9HA90 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.71■■■□□ 2.51
EFCC1Q9HA90 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.71■■■□□ 2.51
EFCC1Q9HA90 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.71■■■□□ 2.51
EFCC1Q9HA90 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
EFCC1Q9HA90 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.7■■■□□ 2.51
EFCC1Q9HA90 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
EFCC1Q9HA90 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
EFCC1Q9HA90 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
EFCC1Q9HA90 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
EFCC1Q9HA90 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.68■■■□□ 2.5
EFCC1Q9HA90 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
EFCC1Q9HA90 GPX1-201ENST00000419349 1106 ntBASIC30.66■■■□□ 2.5
EFCC1Q9HA90 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
EFCC1Q9HA90 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.64■■■□□ 2.5
EFCC1Q9HA90 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
EFCC1Q9HA90 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
EFCC1Q9HA90 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
EFCC1Q9HA90 RNF126P1-201ENST00000567452 1320 ntBASIC30.62■■■□□ 2.49
EFCC1Q9HA90 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.61■■■□□ 2.49
EFCC1Q9HA90 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.6■■■□□ 2.49
EFCC1Q9HA90 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
EFCC1Q9HA90 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
EFCC1Q9HA90 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
EFCC1Q9HA90 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
EFCC1Q9HA90 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
EFCC1Q9HA90 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
EFCC1Q9HA90 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
EFCC1Q9HA90 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
EFCC1Q9HA90 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
EFCC1Q9HA90 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
EFCC1Q9HA90 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
EFCC1Q9HA90 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
EFCC1Q9HA90 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
EFCC1Q9HA90 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
EFCC1Q9HA90 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.56■■■□□ 2.48
EFCC1Q9HA90 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
EFCC1Q9HA90 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
EFCC1Q9HA90 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.55■■■□□ 2.48
EFCC1Q9HA90 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
EFCC1Q9HA90 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.53■■■□□ 2.48
EFCC1Q9HA90 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
EFCC1Q9HA90 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
EFCC1Q9HA90 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
EFCC1Q9HA90 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
EFCC1Q9HA90 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.51■■■□□ 2.47
EFCC1Q9HA90 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.51■■■□□ 2.47
EFCC1Q9HA90 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
EFCC1Q9HA90 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
EFCC1Q9HA90 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
EFCC1Q9HA90 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
EFCC1Q9HA90 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.49■■■□□ 2.47
EFCC1Q9HA90 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
EFCC1Q9HA90 AC120057.4-201ENST00000624722 1615 ntBASIC30.49■■■□□ 2.47
EFCC1Q9HA90 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms