Protein–RNA interactions for Protein: Q9H159

CDH19, Cadherin-19, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19Q9H159 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDH19Q9H159 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.51■■□□□ 1.83
CDH19Q9H159 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDH19Q9H159 AC139426.1-201ENST00000568218 2529 ntBASIC26.51■■□□□ 1.83
CDH19Q9H159 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDH19Q9H159 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CDH19Q9H159 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
CDH19Q9H159 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CDH19Q9H159 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CDH19Q9H159 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDH19Q9H159 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.49■■□□□ 1.83
CDH19Q9H159 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDH19Q9H159 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDH19Q9H159 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.48■■□□□ 1.83
CDH19Q9H159 AC087741.3-201ENST00000624270 1347 ntBASIC26.47■■□□□ 1.83
CDH19Q9H159 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.47■■□□□ 1.83
CDH19Q9H159 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.47■■□□□ 1.83
CDH19Q9H159 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDH19Q9H159 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDH19Q9H159 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CDH19Q9H159 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
CDH19Q9H159 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
CDH19Q9H159 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.45■■□□□ 1.82
CDH19Q9H159 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.45■■□□□ 1.82
CDH19Q9H159 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
CDH19Q9H159 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CDH19Q9H159 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.45■■□□□ 1.82
CDH19Q9H159 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CDH19Q9H159 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDH19Q9H159 AC044849.2-201ENST00000606596 710 ntBASIC26.44■■□□□ 1.82
CDH19Q9H159 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.43■■□□□ 1.82
CDH19Q9H159 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDH19Q9H159 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDH19Q9H159 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDH19Q9H159 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDH19Q9H159 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CDH19Q9H159 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDH19Q9H159 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CDH19Q9H159 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CDH19Q9H159 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CDH19Q9H159 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
CDH19Q9H159 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDH19Q9H159 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDH19Q9H159 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.38■■□□□ 1.81
CDH19Q9H159 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDH19Q9H159 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDH19Q9H159 ST7-AS1-201ENST00000456775 1889 ntBASIC26.37■■□□□ 1.81
CDH19Q9H159 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.37■■□□□ 1.81
CDH19Q9H159 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CDH19Q9H159 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDH19Q9H159 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CDH19Q9H159 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CDH19Q9H159 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
CDH19Q9H159 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDH19Q9H159 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDH19Q9H159 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDH19Q9H159 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CDH19Q9H159 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CDH19Q9H159 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.33■■□□□ 1.81
CDH19Q9H159 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDH19Q9H159 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CDH19Q9H159 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CDH19Q9H159 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CDH19Q9H159 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.31■■□□□ 1.8
CDH19Q9H159 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDH19Q9H159 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.3■■□□□ 1.8
CDH19Q9H159 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CDH19Q9H159 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CDH19Q9H159 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.3■■□□□ 1.8
CDH19Q9H159 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.29■■□□□ 1.8
CDH19Q9H159 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDH19Q9H159 AC108673.1-201ENST00000510422 1159 ntBASIC26.28■■□□□ 1.8
CDH19Q9H159 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.28■■□□□ 1.8
CDH19Q9H159 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDH19Q9H159 AL135925.1-201ENST00000605920 1701 ntBASIC26.27■■□□□ 1.8
CDH19Q9H159 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDH19Q9H159 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CDH19Q9H159 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDH19Q9H159 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDH19Q9H159 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
CDH19Q9H159 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
CDH19Q9H159 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.25■■□□□ 1.79
CDH19Q9H159 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CDH19Q9H159 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CDH19Q9H159 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
CDH19Q9H159 AC010864.1-201ENST00000609407 1511 ntBASIC26.24■■□□□ 1.79
CDH19Q9H159 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDH19Q9H159 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDH19Q9H159 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
CDH19Q9H159 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CDH19Q9H159 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.23■■□□□ 1.79
CDH19Q9H159 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDH19Q9H159 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CDH19Q9H159 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CDH19Q9H159 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.22■■□□□ 1.79
CDH19Q9H159 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDH19Q9H159 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.2■■□□□ 1.78
CDH19Q9H159 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDH19Q9H159 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDH19Q9H159 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms