Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB40CQ96S21 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB40CQ96S21 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB40CQ96S21 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB40CQ96S21 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB40CQ96S21 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB40CQ96S21 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40CQ96S21 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40CQ96S21 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RAB40CQ96S21 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40CQ96S21 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.18■□□□□ 0.98
RAB40CQ96S21 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40CQ96S21 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40CQ96S21 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40CQ96S21 AL121749.1-202ENST00000609313 2153 ntBASIC21.17■□□□□ 0.98
RAB40CQ96S21 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40CQ96S21 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40CQ96S21 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40CQ96S21 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40CQ96S21 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB40CQ96S21 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB40CQ96S21 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB40CQ96S21 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB40CQ96S21 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB40CQ96S21 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB40CQ96S21 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB40CQ96S21 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
RAB40CQ96S21 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RAB40CQ96S21 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40CQ96S21 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.13■□□□□ 0.97
RAB40CQ96S21 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB40CQ96S21 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB40CQ96S21 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB40CQ96S21 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB40CQ96S21 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAB40CQ96S21 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAB40CQ96S21 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB40CQ96S21 DYNLL1-208ENST00000550178 581 ntBASIC21.1■□□□□ 0.97
RAB40CQ96S21 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.09■□□□□ 0.97
RAB40CQ96S21 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40CQ96S21 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40CQ96S21 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RAB40CQ96S21 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40CQ96S21 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB40CQ96S21 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.08■□□□□ 0.97
RAB40CQ96S21 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB40CQ96S21 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAB40CQ96S21 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.07■□□□□ 0.96
RAB40CQ96S21 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB40CQ96S21 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAB40CQ96S21 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RAB40CQ96S21 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.07■□□□□ 0.96
RAB40CQ96S21 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RAB40CQ96S21 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB40CQ96S21 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAB40CQ96S21 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB40CQ96S21 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RAB40CQ96S21 AP002365.1-201ENST00000603448 772 ntBASIC21.05■□□□□ 0.96
RAB40CQ96S21 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.04■□□□□ 0.96
RAB40CQ96S21 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB40CQ96S21 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB40CQ96S21 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB40CQ96S21 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40CQ96S21 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40CQ96S21 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB40CQ96S21 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB40CQ96S21 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB40CQ96S21 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.02■□□□□ 0.96
RAB40CQ96S21 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB40CQ96S21 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB40CQ96S21 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB40CQ96S21 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40CQ96S21 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB40CQ96S21 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21■□□□□ 0.95
RAB40CQ96S21 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB40CQ96S21 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
RAB40CQ96S21 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.99■□□□□ 0.95
RAB40CQ96S21 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.99■□□□□ 0.95
RAB40CQ96S21 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40CQ96S21 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB40CQ96S21 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.99■□□□□ 0.95
RAB40CQ96S21 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RAB40CQ96S21 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40CQ96S21 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40CQ96S21 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40CQ96S21 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40CQ96S21 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40CQ96S21 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40CQ96S21 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.97■□□□□ 0.95
RAB40CQ96S21 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RAB40CQ96S21 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40CQ96S21 AL031258.1-201ENST00000623562 325 ntBASIC20.97■□□□□ 0.95
RAB40CQ96S21 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40CQ96S21 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40CQ96S21 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RAB40CQ96S21 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
RAB40CQ96S21 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB40CQ96S21 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.96■□□□□ 0.95
RAB40CQ96S21 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
RAB40CQ96S21 BX255925.1-201ENST00000566954 1854 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms