Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.27■■□□□ 1.96
PRICKLE1Q96MT3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PRICKLE1Q96MT3 AC108673.1-201ENST00000510422 1159 ntBASIC27.24■■□□□ 1.95
PRICKLE1Q96MT3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PRICKLE1Q96MT3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.23■■□□□ 1.95
PRICKLE1Q96MT3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.22■■□□□ 1.95
PRICKLE1Q96MT3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
PRICKLE1Q96MT3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PRICKLE1Q96MT3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
PRICKLE1Q96MT3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PRICKLE1Q96MT3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.21■■□□□ 1.95
PRICKLE1Q96MT3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
PRICKLE1Q96MT3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PRICKLE1Q96MT3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PRICKLE1Q96MT3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PRICKLE1Q96MT3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
PRICKLE1Q96MT3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
PRICKLE1Q96MT3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.2■■□□□ 1.94
PRICKLE1Q96MT3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.19■■□□□ 1.94
PRICKLE1Q96MT3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.19■■□□□ 1.94
PRICKLE1Q96MT3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PRICKLE1Q96MT3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.18■■□□□ 1.94
PRICKLE1Q96MT3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PRICKLE1Q96MT3 AC010864.1-201ENST00000609407 1511 ntBASIC27.17■■□□□ 1.94
PRICKLE1Q96MT3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.17■■□□□ 1.94
PRICKLE1Q96MT3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.17■■□□□ 1.94
PRICKLE1Q96MT3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.17■■□□□ 1.94
PRICKLE1Q96MT3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PRICKLE1Q96MT3 ABHD17AP4-201ENST00000411545 909 ntBASIC27.16■■□□□ 1.94
PRICKLE1Q96MT3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.16■■□□□ 1.94
PRICKLE1Q96MT3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PRICKLE1Q96MT3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PRICKLE1Q96MT3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.14■■□□□ 1.94
PRICKLE1Q96MT3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.14■■□□□ 1.94
PRICKLE1Q96MT3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.13■■□□□ 1.93
PRICKLE1Q96MT3 AC021231.2-201ENST00000594613 730 ntBASIC27.13■■□□□ 1.93
PRICKLE1Q96MT3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PRICKLE1Q96MT3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.12■■□□□ 1.93
PRICKLE1Q96MT3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PRICKLE1Q96MT3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PRICKLE1Q96MT3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PRICKLE1Q96MT3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PRICKLE1Q96MT3 DUX4L29-201ENST00000425409 679 ntBASIC27.11■■□□□ 1.93
PRICKLE1Q96MT3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.11■■□□□ 1.93
PRICKLE1Q96MT3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PRICKLE1Q96MT3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PRICKLE1Q96MT3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
PRICKLE1Q96MT3 AL135925.1-201ENST00000605920 1701 ntBASIC27.1■■□□□ 1.93
PRICKLE1Q96MT3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
PRICKLE1Q96MT3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.09■■□□□ 1.93
PRICKLE1Q96MT3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PRICKLE1Q96MT3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PRICKLE1Q96MT3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.08■■□□□ 1.93
PRICKLE1Q96MT3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PRICKLE1Q96MT3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PRICKLE1Q96MT3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.07■■□□□ 1.92
PRICKLE1Q96MT3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PRICKLE1Q96MT3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PRICKLE1Q96MT3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.04■■□□□ 1.92
PRICKLE1Q96MT3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PRICKLE1Q96MT3 ZNRF2P2-203ENST00000454624 420 ntBASIC27.04■■□□□ 1.92
PRICKLE1Q96MT3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PRICKLE1Q96MT3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PRICKLE1Q96MT3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
PRICKLE1Q96MT3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PRICKLE1Q96MT3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.02■■□□□ 1.92
PRICKLE1Q96MT3 MIR7108-201ENST00000614319 87 ntBASIC27.01■■□□□ 1.91
PRICKLE1Q96MT3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27■■□□□ 1.91
PRICKLE1Q96MT3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
PRICKLE1Q96MT3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PRICKLE1Q96MT3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PRICKLE1Q96MT3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
PRICKLE1Q96MT3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
PRICKLE1Q96MT3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.98■■□□□ 1.91
PRICKLE1Q96MT3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.97■■□□□ 1.91
PRICKLE1Q96MT3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PRICKLE1Q96MT3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
PRICKLE1Q96MT3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
PRICKLE1Q96MT3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PRICKLE1Q96MT3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PRICKLE1Q96MT3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.94■■□□□ 1.9
PRICKLE1Q96MT3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.94■■□□□ 1.9
PRICKLE1Q96MT3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
PRICKLE1Q96MT3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
PRICKLE1Q96MT3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
PRICKLE1Q96MT3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PRICKLE1Q96MT3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PRICKLE1Q96MT3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
PRICKLE1Q96MT3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
PRICKLE1Q96MT3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PRICKLE1Q96MT3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PRICKLE1Q96MT3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.91■■□□□ 1.9
PRICKLE1Q96MT3 ST7-AS1-201ENST00000456775 1889 ntBASIC26.91■■□□□ 1.9
PRICKLE1Q96MT3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PRICKLE1Q96MT3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PRICKLE1Q96MT3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.9■■□□□ 1.9
PRICKLE1Q96MT3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PRICKLE1Q96MT3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.89■■□□□ 1.9
PRICKLE1Q96MT3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.89■■□□□ 1.9
PRICKLE1Q96MT3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms