Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SPG11Q96JI7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
SPG11Q96JI7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SPG11Q96JI7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SPG11Q96JI7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SPG11Q96JI7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SPG11Q96JI7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SPG11Q96JI7 RNF126P1-201ENST00000567452 1320 ntBASIC22.76■■□□□ 1.23
SPG11Q96JI7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
SPG11Q96JI7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
SPG11Q96JI7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SPG11Q96JI7 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.74■■□□□ 1.23
SPG11Q96JI7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SPG11Q96JI7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.73■■□□□ 1.23
SPG11Q96JI7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.72■■□□□ 1.23
SPG11Q96JI7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
SPG11Q96JI7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.71■■□□□ 1.23
SPG11Q96JI7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
SPG11Q96JI7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SPG11Q96JI7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SPG11Q96JI7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.7■■□□□ 1.22
SPG11Q96JI7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC22.69■■□□□ 1.22
SPG11Q96JI7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
SPG11Q96JI7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SPG11Q96JI7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SPG11Q96JI7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.67■■□□□ 1.22
SPG11Q96JI7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SPG11Q96JI7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SPG11Q96JI7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SPG11Q96JI7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPG11Q96JI7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
SPG11Q96JI7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.66■■□□□ 1.22
SPG11Q96JI7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SPG11Q96JI7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.64■■□□□ 1.22
SPG11Q96JI7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SPG11Q96JI7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.63■■□□□ 1.21
SPG11Q96JI7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.63■■□□□ 1.21
SPG11Q96JI7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPG11Q96JI7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.63■■□□□ 1.21
SPG11Q96JI7 GPX1-201ENST00000419349 1106 ntBASIC22.62■■□□□ 1.21
SPG11Q96JI7 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.61■■□□□ 1.21
SPG11Q96JI7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
SPG11Q96JI7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SPG11Q96JI7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SPG11Q96JI7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SPG11Q96JI7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.59■■□□□ 1.21
SPG11Q96JI7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC22.59■■□□□ 1.21
SPG11Q96JI7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SPG11Q96JI7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.2
SPG11Q96JI7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SPG11Q96JI7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.58■■□□□ 1.2
SPG11Q96JI7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.57■■□□□ 1.2
SPG11Q96JI7 NTF6A-201ENST00000591175 560 ntBASIC22.57■■□□□ 1.2
SPG11Q96JI7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.56■■□□□ 1.2
SPG11Q96JI7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPG11Q96JI7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.56■■□□□ 1.2
SPG11Q96JI7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPG11Q96JI7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SPG11Q96JI7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SPG11Q96JI7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.54■■□□□ 1.2
SPG11Q96JI7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SPG11Q96JI7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SPG11Q96JI7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
SPG11Q96JI7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.52■■□□□ 1.2
SPG11Q96JI7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SPG11Q96JI7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.52■■□□□ 1.2
SPG11Q96JI7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SPG11Q96JI7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPG11Q96JI7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SPG11Q96JI7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.49■■□□□ 1.19
SPG11Q96JI7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SPG11Q96JI7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.49■■□□□ 1.19
SPG11Q96JI7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SPG11Q96JI7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SPG11Q96JI7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.48■■□□□ 1.19
SPG11Q96JI7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.48■■□□□ 1.19
SPG11Q96JI7 AC012354.3-201ENST00000623734 483 ntBASIC22.48■■□□□ 1.19
SPG11Q96JI7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SPG11Q96JI7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SPG11Q96JI7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
SPG11Q96JI7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPG11Q96JI7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.46■■□□□ 1.19
SPG11Q96JI7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPG11Q96JI7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SPG11Q96JI7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SPG11Q96JI7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPG11Q96JI7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms