Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.68■■■□□ 2.34
ATP6V0A1Q93050 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
ATP6V0A1Q93050 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
ATP6V0A1Q93050 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
ATP6V0A1Q93050 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ATP6V0A1Q93050 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ATP6V0A1Q93050 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.65■■■□□ 2.34
ATP6V0A1Q93050 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
ATP6V0A1Q93050 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ATP6V0A1Q93050 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
ATP6V0A1Q93050 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ATP6V0A1Q93050 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ATP6V0A1Q93050 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ATP6V0A1Q93050 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
ATP6V0A1Q93050 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
ATP6V0A1Q93050 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
ATP6V0A1Q93050 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.6■■■□□ 2.33
ATP6V0A1Q93050 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
ATP6V0A1Q93050 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
ATP6V0A1Q93050 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
ATP6V0A1Q93050 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
ATP6V0A1Q93050 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
ATP6V0A1Q93050 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.58■■■□□ 2.33
ATP6V0A1Q93050 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
ATP6V0A1Q93050 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.57■■■□□ 2.32
ATP6V0A1Q93050 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
ATP6V0A1Q93050 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ATP6V0A1Q93050 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ATP6V0A1Q93050 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
ATP6V0A1Q93050 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.55■■■□□ 2.32
ATP6V0A1Q93050 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
ATP6V0A1Q93050 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ATP6V0A1Q93050 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.53■■■□□ 2.32
ATP6V0A1Q93050 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.53■■■□□ 2.32
ATP6V0A1Q93050 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
ATP6V0A1Q93050 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.52■■■□□ 2.32
ATP6V0A1Q93050 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ATP6V0A1Q93050 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
ATP6V0A1Q93050 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.5■■■□□ 2.31
ATP6V0A1Q93050 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.5■■■□□ 2.31
ATP6V0A1Q93050 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ATP6V0A1Q93050 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ATP6V0A1Q93050 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.49■■■□□ 2.31
ATP6V0A1Q93050 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
ATP6V0A1Q93050 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ATP6V0A1Q93050 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ATP6V0A1Q93050 MIR639-201ENST00000384974 98 ntBASIC29.47■■■□□ 2.31
ATP6V0A1Q93050 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.47■■■□□ 2.31
ATP6V0A1Q93050 AC010864.1-201ENST00000609407 1511 ntBASIC29.46■■■□□ 2.31
ATP6V0A1Q93050 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ATP6V0A1Q93050 MIR3648-2-201ENST00000581792 180 ntBASIC29.45■■■□□ 2.31
ATP6V0A1Q93050 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.45■■■□□ 2.31
ATP6V0A1Q93050 MIR3648-1-201ENST00000615959 180 ntBASIC29.45■■■□□ 2.31
ATP6V0A1Q93050 LINC01971-201ENST00000617888 1048 ntBASIC29.45■■■□□ 2.31
ATP6V0A1Q93050 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.3
ATP6V0A1Q93050 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.44■■■□□ 2.3
ATP6V0A1Q93050 MIR4449-201ENST00000578365 66 ntBASIC29.44■■■□□ 2.3
ATP6V0A1Q93050 DUX4L11-201ENST00000611504 1267 ntBASIC29.44■■■□□ 2.3
ATP6V0A1Q93050 DUX4L12-201ENST00000614593 1267 ntBASIC29.44■■■□□ 2.3
ATP6V0A1Q93050 DUX4L14-201ENST00000621227 1267 ntBASIC29.44■■■□□ 2.3
ATP6V0A1Q93050 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.44■■■□□ 2.3
ATP6V0A1Q93050 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ATP6V0A1Q93050 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.43■■■□□ 2.3
ATP6V0A1Q93050 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.43■■■□□ 2.3
ATP6V0A1Q93050 AC016575.1-201ENST00000607026 382 ntBASIC29.43■■■□□ 2.3
ATP6V0A1Q93050 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.41■■■□□ 2.3
ATP6V0A1Q93050 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ATP6V0A1Q93050 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.4■■■□□ 2.3
ATP6V0A1Q93050 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.4■■■□□ 2.3
ATP6V0A1Q93050 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ATP6V0A1Q93050 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ATP6V0A1Q93050 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ATP6V0A1Q93050 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
ATP6V0A1Q93050 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.37■■■□□ 2.29
ATP6V0A1Q93050 AL135925.1-201ENST00000605920 1701 ntBASIC29.37■■■□□ 2.29
ATP6V0A1Q93050 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.37■■■□□ 2.29
ATP6V0A1Q93050 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.37■■■□□ 2.29
ATP6V0A1Q93050 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
ATP6V0A1Q93050 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.35■■■□□ 2.29
ATP6V0A1Q93050 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
ATP6V0A1Q93050 CR559946.2-201ENST00000623684 991 ntBASIC29.35■■■□□ 2.29
ATP6V0A1Q93050 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
ATP6V0A1Q93050 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
ATP6V0A1Q93050 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ATP6V0A1Q93050 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.34■■■□□ 2.29
ATP6V0A1Q93050 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
ATP6V0A1Q93050 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
ATP6V0A1Q93050 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ATP6V0A1Q93050 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.34■■■□□ 2.29
ATP6V0A1Q93050 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.34■■■□□ 2.29
ATP6V0A1Q93050 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ATP6V0A1Q93050 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.33■■■□□ 2.29
ATP6V0A1Q93050 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ATP6V0A1Q93050 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ATP6V0A1Q93050 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
ATP6V0A1Q93050 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.31■■■□□ 2.28
ATP6V0A1Q93050 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
ATP6V0A1Q93050 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ATP6V0A1Q93050 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.27■■■□□ 2.28
ATP6V0A1Q93050 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms