Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
USP6NLQ92738 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
USP6NLQ92738 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.35■■■□□ 2.45
USP6NLQ92738 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
USP6NLQ92738 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
USP6NLQ92738 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
USP6NLQ92738 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.34■■■□□ 2.45
USP6NLQ92738 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.34■■■□□ 2.45
USP6NLQ92738 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.33■■■□□ 2.45
USP6NLQ92738 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
USP6NLQ92738 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.32■■■□□ 2.44
USP6NLQ92738 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.31■■■□□ 2.44
USP6NLQ92738 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.31■■■□□ 2.44
USP6NLQ92738 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.31■■■□□ 2.44
USP6NLQ92738 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
USP6NLQ92738 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.29■■■□□ 2.44
USP6NLQ92738 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.28■■■□□ 2.44
USP6NLQ92738 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.28■■■□□ 2.44
USP6NLQ92738 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
USP6NLQ92738 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
USP6NLQ92738 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.26■■■□□ 2.43
USP6NLQ92738 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
USP6NLQ92738 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
USP6NLQ92738 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.24■■■□□ 2.43
USP6NLQ92738 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.23■■■□□ 2.43
USP6NLQ92738 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP6NLQ92738 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP6NLQ92738 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.22■■■□□ 2.43
USP6NLQ92738 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
USP6NLQ92738 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
USP6NLQ92738 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
USP6NLQ92738 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
USP6NLQ92738 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
USP6NLQ92738 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.19■■■□□ 2.42
USP6NLQ92738 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.19■■■□□ 2.42
USP6NLQ92738 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP6NLQ92738 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.18■■■□□ 2.42
USP6NLQ92738 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP6NLQ92738 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.18■■■□□ 2.42
USP6NLQ92738 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.18■■■□□ 2.42
USP6NLQ92738 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP6NLQ92738 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
USP6NLQ92738 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
USP6NLQ92738 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.15■■■□□ 2.42
USP6NLQ92738 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
USP6NLQ92738 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.15■■■□□ 2.42
USP6NLQ92738 AC120057.4-201ENST00000624722 1615 ntBASIC30.14■■■□□ 2.41
USP6NLQ92738 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
USP6NLQ92738 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
USP6NLQ92738 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
USP6NLQ92738 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.12■■■□□ 2.41
USP6NLQ92738 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
USP6NLQ92738 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.11■■■□□ 2.41
USP6NLQ92738 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
USP6NLQ92738 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
USP6NLQ92738 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
USP6NLQ92738 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.1■■■□□ 2.41
USP6NLQ92738 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
USP6NLQ92738 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
USP6NLQ92738 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
USP6NLQ92738 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
USP6NLQ92738 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
USP6NLQ92738 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
USP6NLQ92738 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.08■■■□□ 2.41
USP6NLQ92738 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
USP6NLQ92738 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
USP6NLQ92738 RARRES2P2-201ENST00000394842 485 ntBASIC30.06■■■□□ 2.4
USP6NLQ92738 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
USP6NLQ92738 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
USP6NLQ92738 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
USP6NLQ92738 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.05■■■□□ 2.4
USP6NLQ92738 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
USP6NLQ92738 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
USP6NLQ92738 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
USP6NLQ92738 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
USP6NLQ92738 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
USP6NLQ92738 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
USP6NLQ92738 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.01■■■□□ 2.39
USP6NLQ92738 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30■■■□□ 2.39
USP6NLQ92738 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30■■■□□ 2.39
USP6NLQ92738 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30■■■□□ 2.39
USP6NLQ92738 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
USP6NLQ92738 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30■■■□□ 2.39
USP6NLQ92738 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
USP6NLQ92738 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
USP6NLQ92738 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
USP6NLQ92738 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
USP6NLQ92738 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
USP6NLQ92738 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
USP6NLQ92738 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
USP6NLQ92738 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
USP6NLQ92738 LINC00273-201ENST00000539813 1452 ntBASIC29.95■■■□□ 2.39
USP6NLQ92738 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
USP6NLQ92738 GPX1-201ENST00000419349 1106 ntBASIC29.95■■■□□ 2.39
USP6NLQ92738 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.95■■■□□ 2.39
USP6NLQ92738 ABHD17AP5-201ENST00000580133 923 ntBASIC29.95■■■□□ 2.39
USP6NLQ92738 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
USP6NLQ92738 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.94■■■□□ 2.38
USP6NLQ92738 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
USP6NLQ92738 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms