Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 LINC01971-201ENST00000617888 1048 ntBASIC32.89■■■□□ 2.86
RTL9Q8NET4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RTL9Q8NET4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
RTL9Q8NET4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.87■■■□□ 2.85
RTL9Q8NET4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
RTL9Q8NET4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
RTL9Q8NET4 MIR639-201ENST00000384974 98 ntBASIC32.86■■■□□ 2.85
RTL9Q8NET4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.83■■■□□ 2.85
RTL9Q8NET4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.83■■■□□ 2.85
RTL9Q8NET4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
RTL9Q8NET4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.82■■■□□ 2.84
RTL9Q8NET4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC32.82■■■□□ 2.84
RTL9Q8NET4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
RTL9Q8NET4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.8■■■□□ 2.84
RTL9Q8NET4 DUX4L11-201ENST00000611504 1267 ntBASIC32.8■■■□□ 2.84
RTL9Q8NET4 DUX4L12-201ENST00000614593 1267 ntBASIC32.8■■■□□ 2.84
RTL9Q8NET4 DUX4L14-201ENST00000621227 1267 ntBASIC32.8■■■□□ 2.84
RTL9Q8NET4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
RTL9Q8NET4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.8■■■□□ 2.84
RTL9Q8NET4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.8■■■□□ 2.84
RTL9Q8NET4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.78■■■□□ 2.84
RTL9Q8NET4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RTL9Q8NET4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.77■■■□□ 2.84
RTL9Q8NET4 MIR3648-2-201ENST00000581792 180 ntBASIC32.77■■■□□ 2.84
RTL9Q8NET4 MIR3648-1-201ENST00000615959 180 ntBASIC32.77■■■□□ 2.84
RTL9Q8NET4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
RTL9Q8NET4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.75■■■□□ 2.83
RTL9Q8NET4 CR559946.2-201ENST00000623684 991 ntBASIC32.75■■■□□ 2.83
RTL9Q8NET4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RTL9Q8NET4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC32.74■■■□□ 2.83
RTL9Q8NET4 AC016575.1-201ENST00000607026 382 ntBASIC32.73■■■□□ 2.83
RTL9Q8NET4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.73■■■□□ 2.83
RTL9Q8NET4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
RTL9Q8NET4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.71■■■□□ 2.83
RTL9Q8NET4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
RTL9Q8NET4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.71■■■□□ 2.83
RTL9Q8NET4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
RTL9Q8NET4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC32.7■■■□□ 2.83
RTL9Q8NET4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.7■■■□□ 2.83
RTL9Q8NET4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
RTL9Q8NET4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC32.7■■■□□ 2.82
RTL9Q8NET4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
RTL9Q8NET4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
RTL9Q8NET4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
RTL9Q8NET4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
RTL9Q8NET4 AC010864.1-201ENST00000609407 1511 ntBASIC32.68■■■□□ 2.82
RTL9Q8NET4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC32.68■■■□□ 2.82
RTL9Q8NET4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.67■■■□□ 2.82
RTL9Q8NET4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
RTL9Q8NET4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.65■■■□□ 2.82
RTL9Q8NET4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
RTL9Q8NET4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
RTL9Q8NET4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC32.65■■■□□ 2.82
RTL9Q8NET4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.65■■■□□ 2.82
RTL9Q8NET4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
RTL9Q8NET4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
RTL9Q8NET4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
RTL9Q8NET4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.64■■■□□ 2.82
RTL9Q8NET4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
RTL9Q8NET4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
RTL9Q8NET4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
RTL9Q8NET4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
RTL9Q8NET4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
RTL9Q8NET4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RTL9Q8NET4 DUX4L13-201ENST00000554103 1267 ntBASIC32.58■■■□□ 2.81
RTL9Q8NET4 DUX4L15-201ENST00000611059 1267 ntBASIC32.58■■■□□ 2.81
RTL9Q8NET4 DUX4L23-201ENST00000615195 1269 ntBASIC32.58■■■□□ 2.81
RTL9Q8NET4 DUX4L24-201ENST00000617576 1269 ntBASIC32.58■■■□□ 2.81
RTL9Q8NET4 DUX4L22-201ENST00000618238 1269 ntBASIC32.58■■■□□ 2.81
RTL9Q8NET4 DUX4L20-201ENST00000619712 1269 ntBASIC32.58■■■□□ 2.81
RTL9Q8NET4 DUX4L21-201ENST00000622058 1269 ntBASIC32.58■■■□□ 2.81
RTL9Q8NET4 DUX4L10-201ENST00000622460 1267 ntBASIC32.58■■■□□ 2.81
RTL9Q8NET4 DUX4L25-201ENST00000624915 1269 ntBASIC32.58■■■□□ 2.81
RTL9Q8NET4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RTL9Q8NET4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RTL9Q8NET4 HSD17B1P1-201ENST00000590052 955 ntBASIC32.57■■■□□ 2.8
RTL9Q8NET4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC32.56■■■□□ 2.8
RTL9Q8NET4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
RTL9Q8NET4 LINC00273-201ENST00000539813 1452 ntBASIC32.55■■■□□ 2.8
RTL9Q8NET4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.55■■■□□ 2.8
RTL9Q8NET4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RTL9Q8NET4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
RTL9Q8NET4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.54■■■□□ 2.8
RTL9Q8NET4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RTL9Q8NET4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
RTL9Q8NET4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RTL9Q8NET4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.53■■■□□ 2.8
RTL9Q8NET4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RTL9Q8NET4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
RTL9Q8NET4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.51■■■□□ 2.79
RTL9Q8NET4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
RTL9Q8NET4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.49■■■□□ 2.79
RTL9Q8NET4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RTL9Q8NET4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.47■■■□□ 2.79
RTL9Q8NET4 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.47■■■□□ 2.79
RTL9Q8NET4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RTL9Q8NET4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.46■■■□□ 2.79
RTL9Q8NET4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.46■■■□□ 2.79
RTL9Q8NET4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
RTL9Q8NET4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms