Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDRT4Q8N9R6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDRT4Q8N9R6 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.46■■□□□ 1.51
CDRT4Q8N9R6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.45■■□□□ 1.5
CDRT4Q8N9R6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDRT4Q8N9R6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
CDRT4Q8N9R6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDRT4Q8N9R6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDRT4Q8N9R6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDRT4Q8N9R6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDRT4Q8N9R6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDRT4Q8N9R6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDRT4Q8N9R6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDRT4Q8N9R6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDRT4Q8N9R6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
CDRT4Q8N9R6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDRT4Q8N9R6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDRT4Q8N9R6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CDRT4Q8N9R6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDRT4Q8N9R6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.4■■□□□ 1.5
CDRT4Q8N9R6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.4■■□□□ 1.5
CDRT4Q8N9R6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CDRT4Q8N9R6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDRT4Q8N9R6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDRT4Q8N9R6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CDRT4Q8N9R6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDRT4Q8N9R6 AC005559.1-201ENST00000589661 871 ntBASIC24.39■■□□□ 1.49
CDRT4Q8N9R6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDRT4Q8N9R6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDRT4Q8N9R6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.38■■□□□ 1.49
CDRT4Q8N9R6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDRT4Q8N9R6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDRT4Q8N9R6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDRT4Q8N9R6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
CDRT4Q8N9R6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
CDRT4Q8N9R6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
CDRT4Q8N9R6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDRT4Q8N9R6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CDRT4Q8N9R6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDRT4Q8N9R6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDRT4Q8N9R6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.34■■□□□ 1.49
CDRT4Q8N9R6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CDRT4Q8N9R6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDRT4Q8N9R6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDRT4Q8N9R6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDRT4Q8N9R6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDRT4Q8N9R6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDRT4Q8N9R6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDRT4Q8N9R6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDRT4Q8N9R6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.31■■□□□ 1.48
CDRT4Q8N9R6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDRT4Q8N9R6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDRT4Q8N9R6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.3■■□□□ 1.48
CDRT4Q8N9R6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDRT4Q8N9R6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDRT4Q8N9R6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDRT4Q8N9R6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDRT4Q8N9R6 AC139426.1-201ENST00000568218 2529 ntBASIC24.29■■□□□ 1.48
CDRT4Q8N9R6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CDRT4Q8N9R6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.29■■□□□ 1.48
CDRT4Q8N9R6 AP006261.1-201ENST00000584783 668 ntBASIC24.29■■□□□ 1.48
CDRT4Q8N9R6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CDRT4Q8N9R6 MIR3665-201ENST00000578708 105 ntBASIC24.28■■□□□ 1.48
CDRT4Q8N9R6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.28■■□□□ 1.48
CDRT4Q8N9R6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CDRT4Q8N9R6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.27■■□□□ 1.48
CDRT4Q8N9R6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDRT4Q8N9R6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.27■■□□□ 1.48
CDRT4Q8N9R6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.27■■□□□ 1.48
CDRT4Q8N9R6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.27■■□□□ 1.48
CDRT4Q8N9R6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.27■■□□□ 1.48
CDRT4Q8N9R6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDRT4Q8N9R6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDRT4Q8N9R6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.27■■□□□ 1.48
CDRT4Q8N9R6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.27■■□□□ 1.48
CDRT4Q8N9R6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDRT4Q8N9R6 DUX4L28-201ENST00000623687 678 ntBASIC24.26■■□□□ 1.47
CDRT4Q8N9R6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDRT4Q8N9R6 AL139393.2-201ENST00000608721 2025 ntBASIC24.24■■□□□ 1.47
CDRT4Q8N9R6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDRT4Q8N9R6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.24■■□□□ 1.47
CDRT4Q8N9R6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.24■■□□□ 1.47
CDRT4Q8N9R6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDRT4Q8N9R6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
CDRT4Q8N9R6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.22■■□□□ 1.47
CDRT4Q8N9R6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDRT4Q8N9R6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDRT4Q8N9R6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDRT4Q8N9R6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDRT4Q8N9R6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CDRT4Q8N9R6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.2■■□□□ 1.46
CDRT4Q8N9R6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.2■■□□□ 1.46
CDRT4Q8N9R6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDRT4Q8N9R6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDRT4Q8N9R6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.19■■□□□ 1.46
CDRT4Q8N9R6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDRT4Q8N9R6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.17■■□□□ 1.46
CDRT4Q8N9R6 AC127502.1-201ENST00000399971 1502 ntBASIC24.17■■□□□ 1.46
CDRT4Q8N9R6 AC108673.1-201ENST00000510422 1159 ntBASIC24.17■■□□□ 1.46
CDRT4Q8N9R6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms