Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.5■□□□□ 0.87
NDUFA11Q86Y39 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NDUFA11Q86Y39 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NDUFA11Q86Y39 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
NDUFA11Q86Y39 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NDUFA11Q86Y39 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NDUFA11Q86Y39 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFA11Q86Y39 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.47■□□□□ 0.87
NDUFA11Q86Y39 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFA11Q86Y39 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.47■□□□□ 0.87
NDUFA11Q86Y39 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.46■□□□□ 0.87
NDUFA11Q86Y39 CR559946.2-201ENST00000623684 991 ntBASIC20.46■□□□□ 0.87
NDUFA11Q86Y39 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFA11Q86Y39 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFA11Q86Y39 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFA11Q86Y39 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NDUFA11Q86Y39 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFA11Q86Y39 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFA11Q86Y39 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.44■□□□□ 0.86
NDUFA11Q86Y39 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFA11Q86Y39 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFA11Q86Y39 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFA11Q86Y39 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFA11Q86Y39 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDUFA11Q86Y39 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDUFA11Q86Y39 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDUFA11Q86Y39 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDUFA11Q86Y39 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFA11Q86Y39 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFA11Q86Y39 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
NDUFA11Q86Y39 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFA11Q86Y39 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NDUFA11Q86Y39 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NDUFA11Q86Y39 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.38■□□□□ 0.85
NDUFA11Q86Y39 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NDUFA11Q86Y39 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDUFA11Q86Y39 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NDUFA11Q86Y39 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFA11Q86Y39 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NDUFA11Q86Y39 DUX4L13-201ENST00000554103 1267 ntBASIC20.36■□□□□ 0.85
NDUFA11Q86Y39 DUX4L15-201ENST00000611059 1267 ntBASIC20.36■□□□□ 0.85
NDUFA11Q86Y39 DUX4L23-201ENST00000615195 1269 ntBASIC20.36■□□□□ 0.85
NDUFA11Q86Y39 DUX4L24-201ENST00000617576 1269 ntBASIC20.36■□□□□ 0.85
NDUFA11Q86Y39 DUX4L22-201ENST00000618238 1269 ntBASIC20.36■□□□□ 0.85
NDUFA11Q86Y39 DUX4L20-201ENST00000619712 1269 ntBASIC20.36■□□□□ 0.85
NDUFA11Q86Y39 DUX4L21-201ENST00000622058 1269 ntBASIC20.36■□□□□ 0.85
NDUFA11Q86Y39 DUX4L10-201ENST00000622460 1267 ntBASIC20.36■□□□□ 0.85
NDUFA11Q86Y39 DUX4L25-201ENST00000624915 1269 ntBASIC20.36■□□□□ 0.85
NDUFA11Q86Y39 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.36■□□□□ 0.85
NDUFA11Q86Y39 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFA11Q86Y39 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFA11Q86Y39 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.35■□□□□ 0.85
NDUFA11Q86Y39 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NDUFA11Q86Y39 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFA11Q86Y39 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFA11Q86Y39 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFA11Q86Y39 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFA11Q86Y39 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.34■□□□□ 0.85
NDUFA11Q86Y39 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFA11Q86Y39 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFA11Q86Y39 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NDUFA11Q86Y39 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFA11Q86Y39 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFA11Q86Y39 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.32■□□□□ 0.84
NDUFA11Q86Y39 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.32■□□□□ 0.84
NDUFA11Q86Y39 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NDUFA11Q86Y39 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
NDUFA11Q86Y39 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFA11Q86Y39 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.3■□□□□ 0.84
NDUFA11Q86Y39 HSD17B1P1-201ENST00000590052 955 ntBASIC20.3■□□□□ 0.84
NDUFA11Q86Y39 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.3■□□□□ 0.84
NDUFA11Q86Y39 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFA11Q86Y39 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.29■□□□□ 0.84
NDUFA11Q86Y39 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFA11Q86Y39 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.29■□□□□ 0.84
NDUFA11Q86Y39 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.29■□□□□ 0.84
NDUFA11Q86Y39 AL161658.1-201ENST00000623641 1967 ntBASIC20.28■□□□□ 0.84
NDUFA11Q86Y39 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.28■□□□□ 0.84
NDUFA11Q86Y39 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFA11Q86Y39 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFA11Q86Y39 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFA11Q86Y39 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFA11Q86Y39 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.27■□□□□ 0.84
NDUFA11Q86Y39 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.26■□□□□ 0.83
NDUFA11Q86Y39 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.26■□□□□ 0.83
NDUFA11Q86Y39 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NDUFA11Q86Y39 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NDUFA11Q86Y39 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.25■□□□□ 0.83
NDUFA11Q86Y39 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFA11Q86Y39 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFA11Q86Y39 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.24■□□□□ 0.83
NDUFA11Q86Y39 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.24■□□□□ 0.83
NDUFA11Q86Y39 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.24■□□□□ 0.83
NDUFA11Q86Y39 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NDUFA11Q86Y39 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFA11Q86Y39 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.24■□□□□ 0.83
NDUFA11Q86Y39 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFA11Q86Y39 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NDUFA11Q86Y39 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFA11Q86Y39 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms