Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL55Q7Z7F7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL55Q7Z7F7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL55Q7Z7F7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRPL55Q7Z7F7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPL55Q7Z7F7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC16.72■□□□□ 0.27
MRPL55Q7Z7F7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MRPL55Q7Z7F7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRPL55Q7Z7F7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MRPL55Q7Z7F7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC16.71■□□□□ 0.27
MRPL55Q7Z7F7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL55Q7Z7F7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPL55Q7Z7F7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC16.71■□□□□ 0.26
MRPL55Q7Z7F7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC16.7■□□□□ 0.26
MRPL55Q7Z7F7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL55Q7Z7F7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL55Q7Z7F7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL55Q7Z7F7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL55Q7Z7F7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MRPL55Q7Z7F7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL55Q7Z7F7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL55Q7Z7F7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC16.69■□□□□ 0.26
MRPL55Q7Z7F7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL55Q7Z7F7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC16.69■□□□□ 0.26
MRPL55Q7Z7F7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL55Q7Z7F7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL55Q7Z7F7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL55Q7Z7F7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL55Q7Z7F7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL55Q7Z7F7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC16.66■□□□□ 0.26
MRPL55Q7Z7F7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL55Q7Z7F7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL55Q7Z7F7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL55Q7Z7F7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL55Q7Z7F7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL55Q7Z7F7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
MRPL55Q7Z7F7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL55Q7Z7F7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL55Q7Z7F7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC16.62■□□□□ 0.25
MRPL55Q7Z7F7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.62■□□□□ 0.25
MRPL55Q7Z7F7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPL55Q7Z7F7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 AC010864.1-201ENST00000609407 1511 ntBASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRPL55Q7Z7F7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC16.6■□□□□ 0.25
MRPL55Q7Z7F7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MRPL55Q7Z7F7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MRPL55Q7Z7F7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC16.58■□□□□ 0.24
MRPL55Q7Z7F7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
MRPL55Q7Z7F7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL55Q7Z7F7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MRPL55Q7Z7F7 AL391121.1-201ENST00000607967 1349 ntBASIC16.57■□□□□ 0.24
MRPL55Q7Z7F7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL55Q7Z7F7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC16.56■□□□□ 0.24
MRPL55Q7Z7F7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
MRPL55Q7Z7F7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC16.56■□□□□ 0.24
MRPL55Q7Z7F7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL55Q7Z7F7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MRPL55Q7Z7F7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 AL139393.2-201ENST00000608721 2025 ntBASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 AC097358.2-201ENST00000607541 1159 ntBASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRPL55Q7Z7F7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRPL55Q7Z7F7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC16.53■□□□□ 0.24
MRPL55Q7Z7F7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPL55Q7Z7F7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPL55Q7Z7F7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPL55Q7Z7F7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPL55Q7Z7F7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPL55Q7Z7F7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPL55Q7Z7F7 AC136428.2-201ENST00000563187 214 ntBASIC16.52■□□□□ 0.24
MRPL55Q7Z7F7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRPL55Q7Z7F7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MRPL55Q7Z7F7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRPL55Q7Z7F7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms