Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.1■■■□□ 2.73
USP50Q70EL3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
USP50Q70EL3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.08■■■□□ 2.73
USP50Q70EL3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
USP50Q70EL3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.06■■■□□ 2.72
USP50Q70EL3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.06■■■□□ 2.72
USP50Q70EL3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.06■■■□□ 2.72
USP50Q70EL3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
USP50Q70EL3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
USP50Q70EL3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
USP50Q70EL3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
USP50Q70EL3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
USP50Q70EL3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
USP50Q70EL3 GPX1-201ENST00000419349 1106 ntBASIC32.02■■■□□ 2.72
USP50Q70EL3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.02■■■□□ 2.72
USP50Q70EL3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32■■■□□ 2.71
USP50Q70EL3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC32■■■□□ 2.71
USP50Q70EL3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC32■■■□□ 2.71
USP50Q70EL3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
USP50Q70EL3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC32■■■□□ 2.71
USP50Q70EL3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32■■■□□ 2.71
USP50Q70EL3 RNF126P1-201ENST00000567452 1320 ntBASIC32■■■□□ 2.71
USP50Q70EL3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
USP50Q70EL3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
USP50Q70EL3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
USP50Q70EL3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.98■■■□□ 2.71
USP50Q70EL3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
USP50Q70EL3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
USP50Q70EL3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
USP50Q70EL3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
USP50Q70EL3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
USP50Q70EL3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
USP50Q70EL3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.96■■■□□ 2.71
USP50Q70EL3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
USP50Q70EL3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
USP50Q70EL3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
USP50Q70EL3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
USP50Q70EL3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
USP50Q70EL3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.91■■■□□ 2.7
USP50Q70EL3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
USP50Q70EL3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
USP50Q70EL3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
USP50Q70EL3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
USP50Q70EL3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
USP50Q70EL3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
USP50Q70EL3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
USP50Q70EL3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
USP50Q70EL3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.86■■■□□ 2.69
USP50Q70EL3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
USP50Q70EL3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.85■■■□□ 2.69
USP50Q70EL3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
USP50Q70EL3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
USP50Q70EL3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.84■■■□□ 2.69
USP50Q70EL3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
USP50Q70EL3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.83■■■□□ 2.69
USP50Q70EL3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.83■■■□□ 2.69
USP50Q70EL3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.82■■■□□ 2.68
USP50Q70EL3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.82■■■□□ 2.68
USP50Q70EL3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
USP50Q70EL3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
USP50Q70EL3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.8■■■□□ 2.68
USP50Q70EL3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
USP50Q70EL3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
USP50Q70EL3 NTF6A-201ENST00000591175 560 ntBASIC31.79■■■□□ 2.68
USP50Q70EL3 AC012354.3-201ENST00000623734 483 ntBASIC31.78■■■□□ 2.68
USP50Q70EL3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
USP50Q70EL3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.77■■■□□ 2.68
USP50Q70EL3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
USP50Q70EL3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
USP50Q70EL3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
USP50Q70EL3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.75■■■□□ 2.67
USP50Q70EL3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
USP50Q70EL3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
USP50Q70EL3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
USP50Q70EL3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
USP50Q70EL3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.71■■■□□ 2.67
USP50Q70EL3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.7■■■□□ 2.67
USP50Q70EL3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.7■■■□□ 2.67
USP50Q70EL3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.7■■■□□ 2.66
USP50Q70EL3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
USP50Q70EL3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.68■■■□□ 2.66
USP50Q70EL3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.67■■■□□ 2.66
USP50Q70EL3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.67■■■□□ 2.66
USP50Q70EL3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.67■■■□□ 2.66
USP50Q70EL3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
USP50Q70EL3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.66■■■□□ 2.66
USP50Q70EL3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
USP50Q70EL3 AC022413.1-201ENST00000624602 984 ntBASIC31.65■■■□□ 2.66
USP50Q70EL3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
USP50Q70EL3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
USP50Q70EL3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.63■■■□□ 2.65
USP50Q70EL3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
USP50Q70EL3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
USP50Q70EL3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
USP50Q70EL3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
USP50Q70EL3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
USP50Q70EL3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
USP50Q70EL3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
USP50Q70EL3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
USP50Q70EL3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms