Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PPP4R3CPQ6ZMV5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.41■■■□□ 2.3
PPP4R3CPQ6ZMV5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PPP4R3CPQ6ZMV5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PPP4R3CPQ6ZMV5 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
PPP4R3CPQ6ZMV5 ABCB10P1-201ENST00000614297 2181 ntBASIC29.39■■■□□ 2.29
PPP4R3CPQ6ZMV5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.38■■■□□ 2.29
PPP4R3CPQ6ZMV5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.38■■■□□ 2.29
PPP4R3CPQ6ZMV5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
PPP4R3CPQ6ZMV5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PPP4R3CPQ6ZMV5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
PPP4R3CPQ6ZMV5 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC29.37■■■□□ 2.29
PPP4R3CPQ6ZMV5 AKR1B10P2-201ENST00000577332 927 ntBASIC29.37■■■□□ 2.29
PPP4R3CPQ6ZMV5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PPP4R3CPQ6ZMV5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PPP4R3CPQ6ZMV5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
PPP4R3CPQ6ZMV5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.35■■■□□ 2.29
PPP4R3CPQ6ZMV5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.34■■■□□ 2.29
PPP4R3CPQ6ZMV5 AC044849.2-201ENST00000606596 710 ntBASIC29.34■■■□□ 2.29
PPP4R3CPQ6ZMV5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PPP4R3CPQ6ZMV5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
PPP4R3CPQ6ZMV5 AC006213.4-201ENST00000616184 634 ntBASIC29.32■■■□□ 2.28
PPP4R3CPQ6ZMV5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PPP4R3CPQ6ZMV5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PPP4R3CPQ6ZMV5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PPP4R3CPQ6ZMV5 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.31■■■□□ 2.28
PPP4R3CPQ6ZMV5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.3■■■□□ 2.28
PPP4R3CPQ6ZMV5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
PPP4R3CPQ6ZMV5 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.3■■■□□ 2.28
PPP4R3CPQ6ZMV5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPP4R3CPQ6ZMV5 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC29.29■■■□□ 2.28
PPP4R3CPQ6ZMV5 ST7-AS1-201ENST00000456775 1889 ntBASIC29.29■■■□□ 2.28
PPP4R3CPQ6ZMV5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPP4R3CPQ6ZMV5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PPP4R3CPQ6ZMV5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.28■■■□□ 2.28
PPP4R3CPQ6ZMV5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PPP4R3CPQ6ZMV5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.28■■■□□ 2.28
PPP4R3CPQ6ZMV5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
PPP4R3CPQ6ZMV5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PPP4R3CPQ6ZMV5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
PPP4R3CPQ6ZMV5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PPP4R3CPQ6ZMV5 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.27■■■□□ 2.28
PPP4R3CPQ6ZMV5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
PPP4R3CPQ6ZMV5 AL135925.1-201ENST00000605920 1701 ntBASIC29.25■■■□□ 2.27
PPP4R3CPQ6ZMV5 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
PPP4R3CPQ6ZMV5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
PPP4R3CPQ6ZMV5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.25■■■□□ 2.27
PPP4R3CPQ6ZMV5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.24■■■□□ 2.27
PPP4R3CPQ6ZMV5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
PPP4R3CPQ6ZMV5 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
PPP4R3CPQ6ZMV5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.23■■■□□ 2.27
PPP4R3CPQ6ZMV5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.23■■■□□ 2.27
PPP4R3CPQ6ZMV5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
PPP4R3CPQ6ZMV5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
PPP4R3CPQ6ZMV5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
PPP4R3CPQ6ZMV5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
PPP4R3CPQ6ZMV5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.2■■■□□ 2.26
PPP4R3CPQ6ZMV5 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC29.2■■■□□ 2.26
PPP4R3CPQ6ZMV5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
PPP4R3CPQ6ZMV5 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R3CPQ6ZMV5 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R3CPQ6ZMV5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R3CPQ6ZMV5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R3CPQ6ZMV5 RN7SL275P-201ENST00000582762 335 ntBASIC29.19■■■□□ 2.26
PPP4R3CPQ6ZMV5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
PPP4R3CPQ6ZMV5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
PPP4R3CPQ6ZMV5 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC29.18■■■□□ 2.26
PPP4R3CPQ6ZMV5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
PPP4R3CPQ6ZMV5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PPP4R3CPQ6ZMV5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
PPP4R3CPQ6ZMV5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.17■■■□□ 2.26
PPP4R3CPQ6ZMV5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
PPP4R3CPQ6ZMV5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PPP4R3CPQ6ZMV5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PPP4R3CPQ6ZMV5 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PPP4R3CPQ6ZMV5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
PPP4R3CPQ6ZMV5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PPP4R3CPQ6ZMV5 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.13■■■□□ 2.25
PPP4R3CPQ6ZMV5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.13■■■□□ 2.25
PPP4R3CPQ6ZMV5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PPP4R3CPQ6ZMV5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
PPP4R3CPQ6ZMV5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.13■■■□□ 2.25
PPP4R3CPQ6ZMV5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PPP4R3CPQ6ZMV5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.12■■■□□ 2.25
PPP4R3CPQ6ZMV5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
PPP4R3CPQ6ZMV5 MTND2P7-201ENST00000521337 640 ntBASIC29.12■■■□□ 2.25
PPP4R3CPQ6ZMV5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
PPP4R3CPQ6ZMV5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PPP4R3CPQ6ZMV5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PPP4R3CPQ6ZMV5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PPP4R3CPQ6ZMV5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
PPP4R3CPQ6ZMV5 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PPP4R3CPQ6ZMV5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.09■■■□□ 2.25
PPP4R3CPQ6ZMV5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.09■■■□□ 2.25
PPP4R3CPQ6ZMV5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.08■■■□□ 2.25
PPP4R3CPQ6ZMV5 AC108673.1-201ENST00000510422 1159 ntBASIC29.08■■■□□ 2.25
PPP4R3CPQ6ZMV5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
PPP4R3CPQ6ZMV5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PPP4R3CPQ6ZMV5 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
PPP4R3CPQ6ZMV5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms