Protein–RNA interactions for Protein: Q04712

RRN11, RNA polymerase I-specific transcription initiation factor RRN11, yeastyeast

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRN11Q04712 PUP1YOR157C 786 nt8.48□□□□□ -1.05
RRN11Q04712 GCD11YER025W 1584 nt8.48□□□□□ -1.05
RRN11Q04712 YJL064WYJL064W 396 nt8.47□□□□□ -1.05
RRN11Q04712 OPI10YOL032W 741 nt8.47□□□□□ -1.05
RRN11Q04712 YOR072WYOR072W 315 nt8.47□□□□□ -1.05
RRN11Q04712 PSD1YNL169C 1503 nt8.47□□□□□ -1.05
RRN11Q04712 MDL2YPL270W 2322 nt8.46□□□□□ -1.05
RRN11Q04712 PAU19YMR325W 375 nt8.45□□□□□ -1.06
RRN11Q04712 EAF3YPR023C 1206 nt8.45□□□□□ -1.06
RRN11Q04712 YPR126CYPR126C 309 nt8.45□□□□□ -1.06
RRN11Q04712 RSC8YFR037C 1674 nt8.45□□□□□ -1.06
RRN11Q04712 DLD2YDL178W 1593 nt8.44□□□□□ -1.06
RRN11Q04712 ADE2YOR128C 1716 nt8.44□□□□□ -1.06
RRN11Q04712 TIM44YIL022W 1296 nt8.44□□□□□ -1.06
RRN11Q04712 SNZ1YMR096W 894 nt8.44□□□□□ -1.06
RRN11Q04712 CTI6YPL181W 1521 nt8.44□□□□□ -1.06
RRN11Q04712 DAK2YFL053W 1776 nt8.43□□□□□ -1.06
RRN11Q04712 SNU66YOR308C 1764 nt8.43□□□□□ -1.06
RRN11Q04712 LSM5YER146W 282 nt8.42□□□□□ -1.06
RRN11Q04712 HIS2YFR025C 1008 nt8.42□□□□□ -1.06
RRN11Q04712 COQ8YGL119W 1506 nt8.42□□□□□ -1.06
RRN11Q04712 CCT2YIL142W 1584 nt8.42□□□□□ -1.06
RRN11Q04712 DUR3YHL016C 2208 nt8.41□□□□□ -1.06
RRN11Q04712 GNP1YDR508C 1992 nt8.41□□□□□ -1.06
RRN11Q04712 TUB4YLR212C 1422 nt8.41□□□□□ -1.06
RRN11Q04712 SPP2YOR148C 558 nt8.41□□□□□ -1.06
RRN11Q04712 CYT1YOR065W 930 nt8.4□□□□□ -1.06
RRN11Q04712 LPD1YFL018C 1500 nt8.39□□□□□ -1.07
RRN11Q04712 VPS62YGR141W 1404 nt8.39□□□□□ -1.07
RRN11Q04712 ARO8YGL202W 1503 nt8.39□□□□□ -1.07
RRN11Q04712 SOL2YCR073W-A 948 nt8.38□□□□□ -1.07
RRN11Q04712 TMA23YMR269W 636 nt8.38□□□□□ -1.07
RRN11Q04712 YPS3YLR121C 1527 nt8.38□□□□□ -1.07
RRN11Q04712 FLR1YBR008C 1647 nt8.37□□□□□ -1.07
RRN11Q04712 DDI1YER143W 1287 nt8.37□□□□□ -1.07
RRN11Q04712 KRE1YNL322C 942 nt8.37□□□□□ -1.07
RRN11Q04712 UGP1YKL035W 1500 nt8.36□□□□□ -1.07
RRN11Q04712 KES1YPL145C 1305 nt8.35□□□□□ -1.07
RRN11Q04712 FMS1YMR020W 1527 nt8.35□□□□□ -1.07
RRN11Q04712 YDR510C-AYDR510C-A 117 nt8.35□□□□□ -1.07
RRN11Q04712 PCP1YGR101W 1041 nt8.35□□□□□ -1.07
RRN11Q04712 IMO32YGR031W 1029 nt8.34□□□□□ -1.07
RRN11Q04712 MAM3YOL060C 2121 nt8.33□□□□□ -1.08
RRN11Q04712 ECM10YEL030W 1935 nt8.33□□□□□ -1.08
RRN11Q04712 ASP3-1YLR155C 1089 nt8.33□□□□□ -1.08
RRN11Q04712 ASP3-2YLR157C 1089 nt8.33□□□□□ -1.08
RRN11Q04712 ASP3-3YLR158C 1089 nt8.33□□□□□ -1.08
RRN11Q04712 ASP3-4YLR160C 1089 nt8.33□□□□□ -1.08
RRN11Q04712 TIP1YBR067C 633 nt8.33□□□□□ -1.08
RRN11Q04712 BET2YPR176C 978 nt8.33□□□□□ -1.08
RRN11Q04712 SGA1YIL099W 1650 nt8.33□□□□□ -1.08
RRN11Q04712 LSB6YJL100W 1824 nt8.32□□□□□ -1.08
RRN11Q04712 SPS100YHR139C 981 nt8.32□□□□□ -1.08
RRN11Q04712 SLG1YOR008C 1137 nt8.32□□□□□ -1.08
RRN11Q04712 MEX67YPL169C 1800 nt8.31□□□□□ -1.08
RRN11Q04712 YDL086WYDL086W 822 nt8.31□□□□□ -1.08
RRN11Q04712 ADE8YDR408C 645 nt8.31□□□□□ -1.08
RRN11Q04712 APS2YJR058C 444 nt8.31□□□□□ -1.08
RRN11Q04712 ACH1YBL015W 1581 nt8.31□□□□□ -1.08
RRN11Q04712 UFD1YGR048W 1086 nt8.27□□□□□ -1.09
RRN11Q04712 RRT8YOL048C 1029 nt8.27□□□□□ -1.09
RRN11Q04712 IGD1YFR017C 588 nt8.26□□□□□ -1.09
RRN11Q04712 NIF3YGL221C 867 nt8.26□□□□□ -1.09
RRN11Q04712 RIB1YBL033C 1038 nt8.26□□□□□ -1.09
RRN11Q04712 ABZ2YMR289W 1125 nt8.26□□□□□ -1.09
RRN11Q04712 YCR025CYCR025C 411 nt8.25□□□□□ -1.09
RRN11Q04712 HEM13YDR044W 987 nt8.25□□□□□ -1.09
RRN11Q04712 QDR2YIL121W 1629 nt8.25□□□□□ -1.09
RRN11Q04712 ZAP1YJL056C 2643 nt8.24□□□□□ -1.09
RRN11Q04712 YJR114WYJR114W 393 nt8.23□□□□□ -1.09
RRN11Q04712 ENO2YHR174W 1314 nt8.23□□□□□ -1.09
RRN11Q04712 DIG1YPL049C 1359 nt8.22□□□□□ -1.09
RRN11Q04712 ERG13YML126C 1476 nt8.22□□□□□ -1.09
RRN11Q04712 YCP4YCR004C 744 nt8.22□□□□□ -1.09
RRN11Q04712 SOD2YHR008C 702 nt8.22□□□□□ -1.09
RRN11Q04712 YIA6YIL006W 1122 nt8.22□□□□□ -1.09
RRN11Q04712 ADE5,7YGL234W 2409 nt8.21□□□□□ -1.1
RRN11Q04712 TVP23YDR084C 600 nt8.2□□□□□ -1.1
RRN11Q04712 YFR036W-AYFR036W-A 651 nt8.19□□□□□ -1.1
RRN11Q04712 ENT4YLL038C 744 nt8.19□□□□□ -1.1
RRN11Q04712 SPE2YOL052C 1191 nt8.19□□□□□ -1.1
RRN11Q04712 TAT2YOL020W 1779 nt8.19□□□□□ -1.1
RRN11Q04712 YDR455CYDR455C 309 nt8.18□□□□□ -1.1
RRN11Q04712 IPL1YPL209C 1104 nt8.17□□□□□ -1.1
RRN11Q04712 GID8YMR135C 1368 nt8.17□□□□□ -1.1
RRN11Q04712 DMA2YNL116W 1569 nt8.17□□□□□ -1.1
RRN11Q04712 AIM1YAL046C 357 nt8.16□□□□□ -1.1
RRN11Q04712 YEL023CYEL023C 2049 nt8.15□□□□□ -1.1
RRN11Q04712 tA(AGC)DtA(AGC)D 73 nt8.15□□□□□ -1.1
RRN11Q04712 tA(AGC)FtA(AGC)F 73 nt8.15□□□□□ -1.1
RRN11Q04712 tA(AGC)GtA(AGC)G 73 nt8.15□□□□□ -1.1
RRN11Q04712 tA(AGC)HtA(AGC)H 73 nt8.15□□□□□ -1.1
RRN11Q04712 tA(AGC)JtA(AGC)J 73 nt8.15□□□□□ -1.1
RRN11Q04712 tA(AGC)K1tA(AGC)K1 73 nt8.15□□□□□ -1.1
RRN11Q04712 tA(AGC)K2tA(AGC)K2 73 nt8.15□□□□□ -1.1
RRN11Q04712 tA(AGC)LtA(AGC)L 73 nt8.15□□□□□ -1.1
RRN11Q04712 tA(AGC)M1tA(AGC)M1 73 nt8.15□□□□□ -1.1
RRN11Q04712 tA(AGC)M2tA(AGC)M2 73 nt8.15□□□□□ -1.1
RRN11Q04712 tA(AGC)PtA(AGC)P 73 nt8.15□□□□□ -1.1
RRN11Q04712 FSH2YMR222C 672 nt8.15□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 48.8 ms