Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 YJR114WYJR114W 393 nt9.34□□□□□ -0.91
RPA49Q01080 KES1YPL145C 1305 nt9.33□□□□□ -0.92
RPA49Q01080 TUB4YLR212C 1422 nt9.32□□□□□ -0.92
RPA49Q01080 YBR232CYBR232C 360 nt9.32□□□□□ -0.92
RPA49Q01080 TVP23YDR084C 600 nt9.31□□□□□ -0.92
RPA49Q01080 SEN2YLR105C 1134 nt9.31□□□□□ -0.92
RPA49Q01080 SGA1YIL099W 1650 nt9.3□□□□□ -0.92
RPA49Q01080 APS2YJR058C 444 nt9.3□□□□□ -0.92
RPA49Q01080 ABZ2YMR289W 1125 nt9.29□□□□□ -0.92
RPA49Q01080 SAC7YDR389W 1965 nt9.29□□□□□ -0.92
RPA49Q01080 NIF3YGL221C 867 nt9.28□□□□□ -0.92
RPA49Q01080 OPI3YJR073C 621 nt9.28□□□□□ -0.92
RPA49Q01080 PAR32YDL173W 888 nt9.27□□□□□ -0.93
RPA49Q01080 ZAP1YJL056C 2643 nt9.26□□□□□ -0.93
RPA49Q01080 UGP1YKL035W 1500 nt9.26□□□□□ -0.93
RPA49Q01080 GID8YMR135C 1368 nt9.25□□□□□ -0.93
RPA49Q01080 KRE1YNL322C 942 nt9.25□□□□□ -0.93
RPA49Q01080 ENO2YHR174W 1314 nt9.25□□□□□ -0.93
RPA49Q01080 YNR064CYNR064C 873 nt9.24□□□□□ -0.93
RPA49Q01080 NAP1YKR048C 1254 nt9.23□□□□□ -0.93
RPA49Q01080 DLD3YEL071W 1491 nt9.22□□□□□ -0.93
RPA49Q01080 MRS6YOR370C 1812 nt9.21□□□□□ -0.93
RPA49Q01080 YHR219WYHR219W 1875 nt9.21□□□□□ -0.93
RPA49Q01080 HIS2YFR025C 1008 nt9.21□□□□□ -0.94
RPA49Q01080 ELO1YJL196C 933 nt9.21□□□□□ -0.94
RPA49Q01080 ITR2YOL103W 1830 nt9.21□□□□□ -0.94
RPA49Q01080 YJL064WYJL064W 396 nt9.2□□□□□ -0.94
RPA49Q01080 YKL133CYKL133C 1392 nt9.19□□□□□ -0.94
RPA49Q01080 AMF1YOR378W 1548 nt9.19□□□□□ -0.94
RPA49Q01080 TIP1YBR067C 633 nt9.18□□□□□ -0.94
RPA49Q01080 IGD1YFR017C 588 nt9.17□□□□□ -0.94
RPA49Q01080 TPC1YGR096W 945 nt9.17□□□□□ -0.94
RPA49Q01080 SPE2YOL052C 1191 nt9.17□□□□□ -0.94
RPA49Q01080 KEL3YPL263C 1956 nt9.17□□□□□ -0.94
RPA49Q01080 RIM8YGL045W 1629 nt9.16□□□□□ -0.94
RPA49Q01080 YGL114WYGL114W 2178 nt9.16□□□□□ -0.94
RPA49Q01080 PCP1YGR101W 1041 nt9.15□□□□□ -0.94
RPA49Q01080 LSR1LSR1 1175 nt9.15□□□□□ -0.94
RPA49Q01080 PAU19YMR325W 375 nt9.14□□□□□ -0.95
RPA49Q01080 NAS2YIL007C 663 nt9.13□□□□□ -0.95
RPA49Q01080 PUP1YOR157C 786 nt9.13□□□□□ -0.95
RPA49Q01080 VMA11YPL234C 495 nt9.13□□□□□ -0.95
RPA49Q01080 LEU2YCL018W 1095 nt9.11□□□□□ -0.95
RPA49Q01080 THP3YPR045C 1413 nt9.11□□□□□ -0.95
RPA49Q01080 RPD3YNL330C 1302 nt9.1□□□□□ -0.95
RPA49Q01080 SSL2YIL143C 2532 nt9.1□□□□□ -0.95
RPA49Q01080 RPN14YGL004C 1254 nt9.09□□□□□ -0.95
RPA49Q01080 HAP5YOR358W 729 nt9.09□□□□□ -0.95
RPA49Q01080 snR31snR31 225 nt9.09□□□□□ -0.95
RPA49Q01080 YMR265CYMR265C 1386 nt9.09□□□□□ -0.95
RPA49Q01080 SUV3YPL029W 2214 nt9.08□□□□□ -0.96
RPA49Q01080 CDD1YLR245C 429 nt9.08□□□□□ -0.96
RPA49Q01080 SWT21YNL187W 1074 nt9.08□□□□□ -0.96
RPA49Q01080 SNX3YOR357C 489 nt9.08□□□□□ -0.96
RPA49Q01080 SFL1YOR140W 2301 nt9.08□□□□□ -0.96
RPA49Q01080 ODC1YPL134C 933 nt9.07□□□□□ -0.96
RPA49Q01080 NAM8YHR086W 1572 nt9.07□□□□□ -0.96
RPA49Q01080 MET1YKR069W 1782 nt9.07□□□□□ -0.96
RPA49Q01080 CWP2YKL096W-A 279 nt9.06□□□□□ -0.96
RPA49Q01080 FSH2YMR222C 672 nt9.06□□□□□ -0.96
RPA49Q01080 tA(AGC)DtA(AGC)D 73 nt9.05□□□□□ -0.96
RPA49Q01080 tA(AGC)FtA(AGC)F 73 nt9.05□□□□□ -0.96
RPA49Q01080 tA(AGC)GtA(AGC)G 73 nt9.05□□□□□ -0.96
RPA49Q01080 tA(AGC)HtA(AGC)H 73 nt9.05□□□□□ -0.96
RPA49Q01080 tA(AGC)JtA(AGC)J 73 nt9.05□□□□□ -0.96
RPA49Q01080 tA(AGC)K1tA(AGC)K1 73 nt9.05□□□□□ -0.96
RPA49Q01080 tA(AGC)K2tA(AGC)K2 73 nt9.05□□□□□ -0.96
RPA49Q01080 tA(AGC)LtA(AGC)L 73 nt9.05□□□□□ -0.96
RPA49Q01080 tA(AGC)M1tA(AGC)M1 73 nt9.05□□□□□ -0.96
RPA49Q01080 tA(AGC)M2tA(AGC)M2 73 nt9.05□□□□□ -0.96
RPA49Q01080 tA(AGC)PtA(AGC)P 73 nt9.05□□□□□ -0.96
RPA49Q01080 IPL1YPL209C 1104 nt9.05□□□□□ -0.96
RPA49Q01080 TIM44YIL022W 1296 nt9.04□□□□□ -0.96
RPA49Q01080 YKR012CYKR012C 378 nt9.04□□□□□ -0.96
RPA49Q01080 YKL053WYKL053W 375 nt9.03□□□□□ -0.96
RPA49Q01080 ADH3YMR083W 1128 nt9.02□□□□□ -0.97
RPA49Q01080 CRC1YOR100C 984 nt9.02□□□□□ -0.97
RPA49Q01080 YMR209CYMR209C 1374 nt9.01□□□□□ -0.97
RPA49Q01080 YCR025CYCR025C 411 nt9.01□□□□□ -0.97
RPA49Q01080 PHB2YGR231C 933 nt9.01□□□□□ -0.97
RPA49Q01080 MOB1YIL106W 945 nt9.01□□□□□ -0.97
RPA49Q01080 SLG1YOR008C 1137 nt9.01□□□□□ -0.97
RPA49Q01080 FLX1YIL134W 936 nt8.99□□□□□ -0.97
RPA49Q01080 ACO2YJL200C 2370 nt8.99□□□□□ -0.97
RPA49Q01080 HEL2YDR266C 1920 nt8.98□□□□□ -0.97
RPA49Q01080 SRP54YPR088C 1626 nt8.98□□□□□ -0.97
RPA49Q01080 REX2YLR059C 810 nt8.97□□□□□ -0.97
RPA49Q01080 KRR1YCL059C 951 nt8.96□□□□□ -0.98
RPA49Q01080 RPC31YNL151C 756 nt8.96□□□□□ -0.98
RPA49Q01080 RIM2YBR192W 1134 nt8.95□□□□□ -0.98
RPA49Q01080 SDS24YBR214W 1584 nt8.95□□□□□ -0.98
RPA49Q01080 BSP1YPR171W 1731 nt8.94□□□□□ -0.98
RPA49Q01080 MDM35YKL053C-A 261 nt8.94□□□□□ -0.98
RPA49Q01080 KGD2YDR148C 1392 nt8.94□□□□□ -0.98
RPA49Q01080 DPL1YDR294C 1770 nt8.94□□□□□ -0.98
RPA49Q01080 CYC3YAL039C 810 nt8.93□□□□□ -0.98
RPA49Q01080 SAN1YDR143C 1833 nt8.92□□□□□ -0.98
RPA49Q01080 DMA2YNL116W 1569 nt8.92□□□□□ -0.98
RPA49Q01080 ENO1YGR254W 1314 nt8.92□□□□□ -0.98
RPA49Q01080 VBA3YCL069W 1377 nt8.9□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms