Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.8■■■□□ 2.52
IRX3P78415 HSD17B1P1-201ENST00000590052 955 ntBASIC30.79■■■□□ 2.52
IRX3P78415 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
IRX3P78415 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
IRX3P78415 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
IRX3P78415 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
IRX3P78415 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
IRX3P78415 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
IRX3P78415 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
IRX3P78415 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
IRX3P78415 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
IRX3P78415 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.75■■■□□ 2.51
IRX3P78415 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
IRX3P78415 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.72■■■□□ 2.51
IRX3P78415 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
IRX3P78415 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
IRX3P78415 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
IRX3P78415 DUX4L13-201ENST00000554103 1267 ntBASIC30.69■■■□□ 2.5
IRX3P78415 DUX4L15-201ENST00000611059 1267 ntBASIC30.69■■■□□ 2.5
IRX3P78415 DUX4L23-201ENST00000615195 1269 ntBASIC30.69■■■□□ 2.5
IRX3P78415 DUX4L24-201ENST00000617576 1269 ntBASIC30.69■■■□□ 2.5
IRX3P78415 DUX4L22-201ENST00000618238 1269 ntBASIC30.69■■■□□ 2.5
IRX3P78415 DUX4L20-201ENST00000619712 1269 ntBASIC30.69■■■□□ 2.5
IRX3P78415 DUX4L21-201ENST00000622058 1269 ntBASIC30.69■■■□□ 2.5
IRX3P78415 DUX4L10-201ENST00000622460 1267 ntBASIC30.69■■■□□ 2.5
IRX3P78415 DUX4L25-201ENST00000624915 1269 ntBASIC30.69■■■□□ 2.5
IRX3P78415 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
IRX3P78415 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
IRX3P78415 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
IRX3P78415 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
IRX3P78415 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
IRX3P78415 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.67■■■□□ 2.5
IRX3P78415 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.67■■■□□ 2.5
IRX3P78415 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.67■■■□□ 2.5
IRX3P78415 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
IRX3P78415 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.66■■■□□ 2.5
IRX3P78415 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.66■■■□□ 2.5
IRX3P78415 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
IRX3P78415 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.65■■■□□ 2.5
IRX3P78415 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.65■■■□□ 2.5
IRX3P78415 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.65■■■□□ 2.5
IRX3P78415 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
IRX3P78415 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
IRX3P78415 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
IRX3P78415 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.63■■■□□ 2.49
IRX3P78415 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
IRX3P78415 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
IRX3P78415 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
IRX3P78415 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.61■■■□□ 2.49
IRX3P78415 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
IRX3P78415 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
IRX3P78415 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
IRX3P78415 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
IRX3P78415 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.6■■■□□ 2.49
IRX3P78415 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
IRX3P78415 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
IRX3P78415 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
IRX3P78415 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.59■■■□□ 2.49
IRX3P78415 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
IRX3P78415 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
IRX3P78415 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.57■■■□□ 2.48
IRX3P78415 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
IRX3P78415 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
IRX3P78415 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.56■■■□□ 2.48
IRX3P78415 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.55■■■□□ 2.48
IRX3P78415 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
IRX3P78415 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
IRX3P78415 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
IRX3P78415 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.53■■■□□ 2.48
IRX3P78415 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
IRX3P78415 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.5■■■□□ 2.47
IRX3P78415 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
IRX3P78415 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
IRX3P78415 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
IRX3P78415 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
IRX3P78415 AL161658.1-201ENST00000623641 1967 ntBASIC30.47■■■□□ 2.47
IRX3P78415 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
IRX3P78415 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.47■■■□□ 2.47
IRX3P78415 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
IRX3P78415 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.46■■■□□ 2.47
IRX3P78415 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
IRX3P78415 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
IRX3P78415 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
IRX3P78415 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
IRX3P78415 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.44■■■□□ 2.46
IRX3P78415 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
IRX3P78415 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.43■■■□□ 2.46
IRX3P78415 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.43■■■□□ 2.46
IRX3P78415 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.42■■■□□ 2.46
IRX3P78415 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.42■■■□□ 2.46
IRX3P78415 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
IRX3P78415 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
IRX3P78415 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.41■■■□□ 2.46
IRX3P78415 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
IRX3P78415 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
IRX3P78415 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
IRX3P78415 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
IRX3P78415 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
IRX3P78415 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
IRX3P78415 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms