Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLDN6P56747 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.55■■□□□ 1.68
CLDN6P56747 DUX4L13-201ENST00000554103 1267 ntBASIC25.55■■□□□ 1.68
CLDN6P56747 DUX4L15-201ENST00000611059 1267 ntBASIC25.55■■□□□ 1.68
CLDN6P56747 DUX4L23-201ENST00000615195 1269 ntBASIC25.55■■□□□ 1.68
CLDN6P56747 DUX4L24-201ENST00000617576 1269 ntBASIC25.55■■□□□ 1.68
CLDN6P56747 DUX4L22-201ENST00000618238 1269 ntBASIC25.55■■□□□ 1.68
CLDN6P56747 DUX4L20-201ENST00000619712 1269 ntBASIC25.55■■□□□ 1.68
CLDN6P56747 DUX4L21-201ENST00000622058 1269 ntBASIC25.55■■□□□ 1.68
CLDN6P56747 DUX4L10-201ENST00000622460 1267 ntBASIC25.55■■□□□ 1.68
CLDN6P56747 DUX4L25-201ENST00000624915 1269 ntBASIC25.55■■□□□ 1.68
CLDN6P56747 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.54■■□□□ 1.68
CLDN6P56747 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.54■■□□□ 1.68
CLDN6P56747 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLDN6P56747 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CLDN6P56747 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLDN6P56747 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.52■■□□□ 1.68
CLDN6P56747 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CLDN6P56747 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.49■■□□□ 1.67
CLDN6P56747 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.49■■□□□ 1.67
CLDN6P56747 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLDN6P56747 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.48■■□□□ 1.67
CLDN6P56747 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.48■■□□□ 1.67
CLDN6P56747 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CLDN6P56747 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.46■■□□□ 1.67
CLDN6P56747 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.46■■□□□ 1.67
CLDN6P56747 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
CLDN6P56747 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.45■■□□□ 1.67
CLDN6P56747 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CLDN6P56747 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.45■■□□□ 1.66
CLDN6P56747 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CLDN6P56747 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.44■■□□□ 1.66
CLDN6P56747 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CLDN6P56747 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
CLDN6P56747 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
CLDN6P56747 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CLDN6P56747 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.43■■□□□ 1.66
CLDN6P56747 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.43■■□□□ 1.66
CLDN6P56747 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.43■■□□□ 1.66
CLDN6P56747 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CLDN6P56747 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
CLDN6P56747 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CLDN6P56747 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.41■■□□□ 1.66
CLDN6P56747 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CLDN6P56747 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CLDN6P56747 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLDN6P56747 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CLDN6P56747 RARRES2P2-201ENST00000394842 485 ntBASIC25.4■■□□□ 1.66
CLDN6P56747 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CLDN6P56747 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
CLDN6P56747 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.4■■□□□ 1.66
CLDN6P56747 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CLDN6P56747 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.39■■□□□ 1.66
CLDN6P56747 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CLDN6P56747 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.39■■□□□ 1.65
CLDN6P56747 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CLDN6P56747 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CLDN6P56747 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLDN6P56747 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLDN6P56747 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLDN6P56747 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLDN6P56747 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLDN6P56747 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLDN6P56747 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CLDN6P56747 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLDN6P56747 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLDN6P56747 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLDN6P56747 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CLDN6P56747 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CLDN6P56747 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CLDN6P56747 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CLDN6P56747 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CLDN6P56747 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.35■■□□□ 1.65
CLDN6P56747 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLDN6P56747 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLDN6P56747 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CLDN6P56747 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CLDN6P56747 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
CLDN6P56747 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLDN6P56747 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.33■■□□□ 1.65
CLDN6P56747 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.33■■□□□ 1.65
CLDN6P56747 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLDN6P56747 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
CLDN6P56747 GPX1-201ENST00000419349 1106 ntBASIC25.32■■□□□ 1.64
CLDN6P56747 AC120057.4-201ENST00000624722 1615 ntBASIC25.32■■□□□ 1.64
CLDN6P56747 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
CLDN6P56747 ABHD17AP5-201ENST00000580133 923 ntBASIC25.3■■□□□ 1.64
CLDN6P56747 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
CLDN6P56747 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CLDN6P56747 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CLDN6P56747 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CLDN6P56747 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLDN6P56747 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
CLDN6P56747 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.27■■□□□ 1.64
CLDN6P56747 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.27■■□□□ 1.64
CLDN6P56747 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.27■■□□□ 1.64
CLDN6P56747 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.26■■□□□ 1.63
CLDN6P56747 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
CLDN6P56747 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.26■■□□□ 1.63
CLDN6P56747 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms