Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 NAT4YMR069W 858 nt9.18□□□□□ -0.94
SUB1P54000 TAT2YOL020W 1779 nt9.18□□□□□ -0.94
SUB1P54000 YOR300WYOR300W 309 nt9.18□□□□□ -0.94
SUB1P54000 MSC1YML128C 1542 nt9.17□□□□□ -0.94
SUB1P54000 YLR279WYLR279W 390 nt9.17□□□□□ -0.94
SUB1P54000 DLD3YEL071W 1491 nt9.16□□□□□ -0.94
SUB1P54000 PHO23YNL097C 993 nt9.16□□□□□ -0.94
SUB1P54000 YLR046CYLR046C 813 nt9.15□□□□□ -0.94
SUB1P54000 TIM44YIL022W 1296 nt9.14□□□□□ -0.95
SUB1P54000 MSB4YOL112W 1479 nt9.14□□□□□ -0.95
SUB1P54000 DAL7YIR031C 1665 nt9.13□□□□□ -0.95
SUB1P54000 CWP2YKL096W-A 279 nt9.13□□□□□ -0.95
SUB1P54000 DPH5YLR172C 903 nt9.13□□□□□ -0.95
SUB1P54000 TSC10YBR265W 963 nt9.13□□□□□ -0.95
SUB1P54000 RPD3YNL330C 1302 nt9.12□□□□□ -0.95
SUB1P54000 HDA1YNL021W 2121 nt9.11□□□□□ -0.95
SUB1P54000 SOL2YCR073W-A 948 nt9.11□□□□□ -0.95
SUB1P54000 RAS2YNL098C 969 nt9.1□□□□□ -0.95
SUB1P54000 ITR2YOL103W 1830 nt9.1□□□□□ -0.95
SUB1P54000 YHC3YJL059W 1227 nt9.09□□□□□ -0.95
SUB1P54000 YPL041CYPL041C 624 nt9.09□□□□□ -0.95
SUB1P54000 LPD1YFL018C 1500 nt9.09□□□□□ -0.95
SUB1P54000 FCY21YER060W 1587 nt9.08□□□□□ -0.96
SUB1P54000 CSM1YCR086W 573 nt9.08□□□□□ -0.96
SUB1P54000 APT2YDR441C 546 nt9.08□□□□□ -0.96
SUB1P54000 YOR072WYOR072W 315 nt9.08□□□□□ -0.96
SUB1P54000 YDR455CYDR455C 309 nt9.07□□□□□ -0.96
SUB1P54000 ASP3-1YLR155C 1089 nt9.07□□□□□ -0.96
SUB1P54000 ASP3-2YLR157C 1089 nt9.07□□□□□ -0.96
SUB1P54000 ASP3-3YLR158C 1089 nt9.07□□□□□ -0.96
SUB1P54000 ASP3-4YLR160C 1089 nt9.07□□□□□ -0.96
SUB1P54000 YGR012WYGR012W 1182 nt9.06□□□□□ -0.96
SUB1P54000 ENT4YLL038C 744 nt9.06□□□□□ -0.96
SUB1P54000 GPN2YOR262W 1044 nt9.06□□□□□ -0.96
SUB1P54000 AGP3YFL055W 1677 nt9.06□□□□□ -0.96
SUB1P54000 NUC1YJL208C 990 nt9.05□□□□□ -0.96
SUB1P54000 HAL5YJL165C 2568 nt9.05□□□□□ -0.96
SUB1P54000 SDH5YOL071W 489 nt9.04□□□□□ -0.96
SUB1P54000 YMR262WYMR262W 942 nt9.03□□□□□ -0.96
SUB1P54000 TIP1YBR067C 633 nt9.03□□□□□ -0.96
SUB1P54000 MET1YKR069W 1782 nt9.02□□□□□ -0.97
SUB1P54000 PCP1YGR101W 1041 nt9.02□□□□□ -0.97
SUB1P54000 CRN1YLR429W 1956 nt9.01□□□□□ -0.97
SUB1P54000 CCR4YAL021C 2514 nt9□□□□□ -0.97
SUB1P54000 PRY1YJL079C 900 nt9□□□□□ -0.97
SUB1P54000 VMA11YPL234C 495 nt9□□□□□ -0.97
SUB1P54000 CMK2YOL016C 1344 nt9□□□□□ -0.97
SUB1P54000 LSM5YER146W 282 nt8.99□□□□□ -0.97
SUB1P54000 RPC31YNL151C 756 nt8.99□□□□□ -0.97
SUB1P54000 EAF3YPR023C 1206 nt8.99□□□□□ -0.97
SUB1P54000 RIM2YBR192W 1134 nt8.99□□□□□ -0.97
SUB1P54000 SMC5YOL034W 3282 nt8.99□□□□□ -0.97
SUB1P54000 NBA1YOL070C 1506 nt8.99□□□□□ -0.97
SUB1P54000 SAM3YPL274W 1764 nt8.99□□□□□ -0.97
SUB1P54000 DPL1YDR294C 1770 nt8.98□□□□□ -0.97
SUB1P54000 RBS1YDL189W 1374 nt8.98□□□□□ -0.97
SUB1P54000 MEX67YPL169C 1800 nt8.96□□□□□ -0.97
SUB1P54000 SNX3YOR357C 489 nt8.96□□□□□ -0.98
SUB1P54000 LSB5YCL034W 1065 nt8.96□□□□□ -0.98
SUB1P54000 YRF1-2YER190W 5046 nt8.96□□□□□ -0.98
SUB1P54000 ERG13YML126C 1476 nt8.96□□□□□ -0.98
SUB1P54000 OYE2YHR179W 1203 nt8.95□□□□□ -0.98
SUB1P54000 SMM1YNR015W 1155 nt8.95□□□□□ -0.98
SUB1P54000 LEU4YNL104C 1860 nt8.94□□□□□ -0.98
SUB1P54000 YPL222C-AYPL222C-A 246 nt8.94□□□□□ -0.98
SUB1P54000 IDP3YNL009W 1263 nt8.93□□□□□ -0.98
SUB1P54000 TPS1YBR126C 1488 nt8.93□□□□□ -0.98
SUB1P54000 NDE1YMR145C 1683 nt8.93□□□□□ -0.98
SUB1P54000 SAC7YDR389W 1965 nt8.93□□□□□ -0.98
SUB1P54000 RPT5YOR117W 1305 nt8.92□□□□□ -0.98
SUB1P54000 DDI1YER143W 1287 nt8.92□□□□□ -0.98
SUB1P54000 CIR2YOR356W 1896 nt8.91□□□□□ -0.98
SUB1P54000 ATG22YCL038C 1587 nt8.9□□□□□ -0.98
SUB1P54000 INH1YDL181W 258 nt8.9□□□□□ -0.98
SUB1P54000 NPP2YEL016C 1482 nt8.88□□□□□ -0.99
SUB1P54000 GND1YHR183W 1470 nt8.88□□□□□ -0.99
SUB1P54000 KRR1YCL059C 951 nt8.87□□□□□ -0.99
SUB1P54000 CAB5YDR196C 726 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)BtD(GUC)B 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)DtD(GUC)D 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)G1tD(GUC)G1 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)G2tD(GUC)G2 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)I1tD(GUC)I1 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)I2tD(GUC)I2 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)J1tD(GUC)J1 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)J2tD(GUC)J2 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)J3tD(GUC)J3 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)J4tD(GUC)J4 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)KtD(GUC)K 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)L1tD(GUC)L1 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)L2tD(GUC)L2 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)MtD(GUC)M 72 nt8.87□□□□□ -0.99
SUB1P54000 tD(GUC)OtD(GUC)O 72 nt8.87□□□□□ -0.99
SUB1P54000 YJL118WYJL118W 660 nt8.87□□□□□ -0.99
SUB1P54000 ELO1YJL196C 933 nt8.87□□□□□ -0.99
SUB1P54000 FET5YFL041W 1869 nt8.87□□□□□ -0.99
SUB1P54000 YEN1YER041W 2280 nt8.86□□□□□ -0.99
SUB1P54000 YJL055WYJL055W 738 nt8.86□□□□□ -0.99
SUB1P54000 BAP3YDR046C 1815 nt8.84□□□□□ -0.99
SUB1P54000 TMA23YMR269W 636 nt8.84□□□□□ -0.99
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms