Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 GSF2YML048W 1212 nt10.05□□□□□ -0.8
HDA1P53973 YGR139WYGR139W 339 nt10.03□□□□□ -0.8
HDA1P53973 NAP1YKR048C 1254 nt10.03□□□□□ -0.8
HDA1P53973 PAU19YMR325W 375 nt10.02□□□□□ -0.81
HDA1P53973 ARO8YGL202W 1503 nt10.02□□□□□ -0.81
HDA1P53973 MUP1YGR055W 1725 nt10.02□□□□□ -0.81
HDA1P53973 HOL1YNR055C 1761 nt10.01□□□□□ -0.81
HDA1P53973 TVP23YDR084C 600 nt10.01□□□□□ -0.81
HDA1P53973 CMP2YML057W 1815 nt10□□□□□ -0.81
HDA1P53973 YJR114WYJR114W 393 nt9.99□□□□□ -0.81
HDA1P53973 PAR32YDL173W 888 nt9.96□□□□□ -0.82
HDA1P53973 ABZ2YMR289W 1125 nt9.96□□□□□ -0.82
HDA1P53973 QDR2YIL121W 1629 nt9.96□□□□□ -0.82
HDA1P53973 ITR2YOL103W 1830 nt9.96□□□□□ -0.82
HDA1P53973 IGD1YFR017C 588 nt9.95□□□□□ -0.82
HDA1P53973 SLG1YOR008C 1137 nt9.94□□□□□ -0.82
HDA1P53973 ZAP1YJL056C 2643 nt9.93□□□□□ -0.82
HDA1P53973 COQ8YGL119W 1506 nt9.92□□□□□ -0.82
HDA1P53973 SFL1YOR140W 2301 nt9.91□□□□□ -0.82
HDA1P53973 YHR219WYHR219W 1875 nt9.91□□□□□ -0.82
HDA1P53973 DIG1YPL049C 1359 nt9.91□□□□□ -0.82
HDA1P53973 ELO1YJL196C 933 nt9.91□□□□□ -0.82
HDA1P53973 YLR046CYLR046C 813 nt9.91□□□□□ -0.82
HDA1P53973 DLD3YEL071W 1491 nt9.91□□□□□ -0.82
HDA1P53973 TIP1YBR067C 633 nt9.9□□□□□ -0.82
HDA1P53973 GID8YMR135C 1368 nt9.89□□□□□ -0.83
HDA1P53973 MRS6YOR370C 1812 nt9.89□□□□□ -0.83
HDA1P53973 KES1YPL145C 1305 nt9.89□□□□□ -0.83
HDA1P53973 ENT4YLL038C 744 nt9.89□□□□□ -0.83
HDA1P53973 YNR064CYNR064C 873 nt9.89□□□□□ -0.83
HDA1P53973 TPC1YGR096W 945 nt9.88□□□□□ -0.83
HDA1P53973 SPE2YOL052C 1191 nt9.88□□□□□ -0.83
HDA1P53973 tA(AGC)DtA(AGC)D 73 nt9.87□□□□□ -0.83
HDA1P53973 tA(AGC)FtA(AGC)F 73 nt9.87□□□□□ -0.83
HDA1P53973 tA(AGC)GtA(AGC)G 73 nt9.87□□□□□ -0.83
HDA1P53973 tA(AGC)HtA(AGC)H 73 nt9.87□□□□□ -0.83
HDA1P53973 tA(AGC)JtA(AGC)J 73 nt9.87□□□□□ -0.83
HDA1P53973 tA(AGC)K1tA(AGC)K1 73 nt9.87□□□□□ -0.83
HDA1P53973 tA(AGC)K2tA(AGC)K2 73 nt9.87□□□□□ -0.83
HDA1P53973 tA(AGC)LtA(AGC)L 73 nt9.87□□□□□ -0.83
HDA1P53973 tA(AGC)M1tA(AGC)M1 73 nt9.87□□□□□ -0.83
HDA1P53973 tA(AGC)M2tA(AGC)M2 73 nt9.87□□□□□ -0.83
HDA1P53973 tA(AGC)PtA(AGC)P 73 nt9.87□□□□□ -0.83
HDA1P53973 SGA1YIL099W 1650 nt9.87□□□□□ -0.83
HDA1P53973 HSL7YBR133C 2484 nt9.85□□□□□ -0.83
HDA1P53973 THP3YPR045C 1413 nt9.85□□□□□ -0.83
HDA1P53973 PHB2YGR231C 933 nt9.85□□□□□ -0.83
HDA1P53973 LSR1LSR1 1175 nt9.85□□□□□ -0.83
HDA1P53973 SUV3YPL029W 2214 nt9.84□□□□□ -0.83
HDA1P53973 AMF1YOR378W 1548 nt9.83□□□□□ -0.84
HDA1P53973 ENO2YHR174W 1314 nt9.82□□□□□ -0.84
HDA1P53973 PCP1YGR101W 1041 nt9.82□□□□□ -0.84
HDA1P53973 ADH3YMR083W 1128 nt9.82□□□□□ -0.84
HDA1P53973 SWT21YNL187W 1074 nt9.82□□□□□ -0.84
HDA1P53973 KRE1YNL322C 942 nt9.82□□□□□ -0.84
HDA1P53973 IPL1YPL209C 1104 nt9.82□□□□□ -0.84
HDA1P53973 YKL133CYKL133C 1392 nt9.81□□□□□ -0.84
HDA1P53973 UGP1YKL035W 1500 nt9.81□□□□□ -0.84
HDA1P53973 MET1YKR069W 1782 nt9.79□□□□□ -0.84
HDA1P53973 TIM44YIL022W 1296 nt9.78□□□□□ -0.84
HDA1P53973 KEL3YPL263C 1956 nt9.77□□□□□ -0.84
HDA1P53973 YKL053WYKL053W 375 nt9.77□□□□□ -0.85
HDA1P53973 NAM8YHR086W 1572 nt9.76□□□□□ -0.85
HDA1P53973 FLX1YIL134W 936 nt9.76□□□□□ -0.85
HDA1P53973 CRC1YOR100C 984 nt9.74□□□□□ -0.85
HDA1P53973 LYS20YDL182W 1287 nt9.73□□□□□ -0.85
HDA1P53973 YKR012CYKR012C 378 nt9.71□□□□□ -0.86
HDA1P53973 FSH2YMR222C 672 nt9.71□□□□□ -0.86
HDA1P53973 LEU2YCL018W 1095 nt9.71□□□□□ -0.86
HDA1P53973 YMR265CYMR265C 1386 nt9.71□□□□□ -0.86
HDA1P53973 YCR025CYCR025C 411 nt9.7□□□□□ -0.86
HDA1P53973 HAP5YOR358W 729 nt9.7□□□□□ -0.86
HDA1P53973 SSL2YIL143C 2532 nt9.7□□□□□ -0.86
HDA1P53973 MOB1YIL106W 945 nt9.69□□□□□ -0.86
HDA1P53973 SAM50YNL026W 1455 nt9.69□□□□□ -0.86
HDA1P53973 VMA11YPL234C 495 nt9.69□□□□□ -0.86
HDA1P53973 SDS24YBR214W 1584 nt9.68□□□□□ -0.86
HDA1P53973 SWM1YDR260C 513 nt9.68□□□□□ -0.86
HDA1P53973 RIM2YBR192W 1134 nt9.68□□□□□ -0.86
HDA1P53973 RIB1YBL033C 1038 nt9.67□□□□□ -0.86
HDA1P53973 SNX3YOR357C 489 nt9.66□□□□□ -0.86
HDA1P53973 SAN1YDR143C 1833 nt9.66□□□□□ -0.86
HDA1P53973 VBA3YCL069W 1377 nt9.65□□□□□ -0.86
HDA1P53973 KGD2YDR148C 1392 nt9.63□□□□□ -0.87
HDA1P53973 RPD3YNL330C 1302 nt9.63□□□□□ -0.87
HDA1P53973 ACO2YJL200C 2370 nt9.63□□□□□ -0.87
HDA1P53973 REX2YLR059C 810 nt9.63□□□□□ -0.87
HDA1P53973 YCP4YCR004C 744 nt9.62□□□□□ -0.87
HDA1P53973 HIS2YFR025C 1008 nt9.62□□□□□ -0.87
HDA1P53973 ERG6YML008C 1152 nt9.62□□□□□ -0.87
HDA1P53973 SER2YGR208W 930 nt9.61□□□□□ -0.87
HDA1P53973 ODC1YPL134C 933 nt9.61□□□□□ -0.87
HDA1P53973 SRP54YPR088C 1626 nt9.6□□□□□ -0.87
HDA1P53973 DPL1YDR294C 1770 nt9.6□□□□□ -0.87
HDA1P53973 snR31snR31 225 nt9.58□□□□□ -0.88
HDA1P53973 RIM8YGL045W 1629 nt9.57□□□□□ -0.88
HDA1P53973 TGA1tA(UGC)A 73 nt9.57□□□□□ -0.88
HDA1P53973 tA(UGC)EtA(UGC)E 73 nt9.57□□□□□ -0.88
HDA1P53973 tA(UGC)GtA(UGC)G 73 nt9.57□□□□□ -0.88
HDA1P53973 tA(UGC)LtA(UGC)L 73 nt9.57□□□□□ -0.88
Retrieved 100 of 7,029 protein–RNA pairs in 46.2 ms